Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.79□□□□□ -0.36
Ndufb11O09111 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Ndufb11O09111 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.79□□□□□ -0.36
Ndufb11O09111 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ndufb11O09111 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ndufb11O09111 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ndufb11O09111 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.79□□□□□ -0.36
Ndufb11O09111 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.79□□□□□ -0.36
Ndufb11O09111 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.79□□□□□ -0.36
Ndufb11O09111 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ndufb11O09111 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndufb11O09111 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.78□□□□□ -0.36
Ndufb11O09111 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ndufb11O09111 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ndufb11O09111 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.78□□□□□ -0.36
Ndufb11O09111 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.78□□□□□ -0.36
Ndufb11O09111 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.78□□□□□ -0.36
Ndufb11O09111 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ndufb11O09111 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.78□□□□□ -0.36
Ndufb11O09111 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Ndufb11O09111 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.78□□□□□ -0.36
Ndufb11O09111 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.78□□□□□ -0.36
Ndufb11O09111 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Ndufb11O09111 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ndufb11O09111 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ndufb11O09111 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ndufb11O09111 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndufb11O09111 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndufb11O09111 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ndufb11O09111 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Ndufb11O09111 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndufb11O09111 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndufb11O09111 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndufb11O09111 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndufb11O09111 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndufb11O09111 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ndufb11O09111 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndufb11O09111 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndufb11O09111 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndufb11O09111 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.77□□□□□ -0.36
Ndufb11O09111 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndufb11O09111 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ndufb11O09111 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ndufb11O09111 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.77□□□□□ -0.37
Ndufb11O09111 Gm43173-201ENSMUST00000202246 593 ntBASIC12.77□□□□□ -0.37
Ndufb11O09111 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndufb11O09111 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ndufb11O09111 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndufb11O09111 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ndufb11O09111 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ndufb11O09111 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndufb11O09111 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ndufb11O09111 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ndufb11O09111 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ndufb11O09111 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndufb11O09111 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ndufb11O09111 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.77□□□□□ -0.37
Ndufb11O09111 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndufb11O09111 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms