Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Gm10542F6XDR3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gm10542F6XDR3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Asic1-205ENSMUST00000228185 1818 ntBASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10542F6XDR3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms