Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Gm44430-201ENSMUST00000203376 995 ntBASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-1A0N8R1 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-1A0N8R1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav12-1A0N8R1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12-1A0N8R1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12-1A0N8R1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav12-1A0N8R1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12-1A0N8R1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12-1A0N8R1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12-1A0N8R1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12-1A0N8R1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Gm10052-201ENSMUST00000168019 960 ntBASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Gm18959-201ENSMUST00000208954 655 ntBASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Gm7729-201ENSMUST00000050143 801 ntBASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-1A0N8R1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Gm27389-201ENSMUST00000183622 195 ntBASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Gm37722-201ENSMUST00000193757 208 ntBASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms