Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcna-ps2A0A140T8V5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcna-ps2A0A140T8V5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcna-ps2A0A140T8V5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Pcna-ps2A0A140T8V5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcna-ps2A0A140T8V5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcna-ps2A0A140T8V5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Pcna-ps2A0A140T8V5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcna-ps2A0A140T8V5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcna-ps2A0A140T8V5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Gm6345-202ENSMUST00000180900 204 ntBASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcna-ps2A0A140T8V5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcna-ps2A0A140T8V5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Gm7977-201ENSMUST00000193787 748 ntBASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Gm17808-201ENSMUST00000200859 894 ntBASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcna-ps2A0A140T8V5 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcna-ps2A0A140T8V5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcna-ps2A0A140T8V5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms