Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 Gm11594-201ENSMUST00000122313 162 ntBASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cfap99A0A140LIX9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cfap99A0A140LIX9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.95■□□□□ 0.62
Cfap99A0A140LIX9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 Gm5264-201ENSMUST00000190584 848 ntBASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap99A0A140LIX9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms