Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Gm10013-201ENSMUST00000106074 672 ntBASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Gm11355-201ENSMUST00000121120 306 ntBASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Mir7071-201ENSMUST00000184847 69 ntBASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Gm36967-201ENSMUST00000193814 266 ntBASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Igkv4-53A0A0G2JFC6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.23□□□□□ -0.61
Igkv4-53A0A0G2JFC6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms