Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.09□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm37292-201ENSMUST00000192062 758 ntBASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm10517-202ENSMUST00000192970 758 ntBASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms