Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Gm27357-201ENSMUST00000183754 135 ntBASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-4A0A075B6B4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Gm44454-201ENSMUST00000198541 138 ntBASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-4A0A075B6B4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Mir6404-201ENSMUST00000183699 94 ntBASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms