Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.51
Trav6n-6A0A075B6B2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6n-6A0A075B6B2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Il3ra-202ENSMUST00000223589 738 ntBASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6n-6A0A075B6B2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm2274-201ENSMUST00000184539 609 ntBASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6n-6A0A075B6B2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6n-6A0A075B6B2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav6n-6A0A075B6B2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms