Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-7A0A075B6B0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-7A0A075B6B0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6d-7A0A075B6B0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms