Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Gm14117-201ENSMUST00000122417 843 ntBASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Rps24-207ENSMUST00000224568 714 ntBASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-4A0A075B654 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Gm11643-201ENSMUST00000119578 864 ntBASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Mir2861-201ENSMUST00000175539 82 ntBASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 AC140264.2-202ENSMUST00000218746 817 ntBASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Reep4-203ENSMUST00000226563 1444 ntBASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-4A0A075B654 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-4A0A075B654 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms