Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Gm6576-201ENSMUST00000169678 883 ntBASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Gm9959-201ENSMUST00000068277 390 ntBASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-3A0A075B648 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Gm2399-201ENSMUST00000104944 225 ntBASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Mir7075-201ENSMUST00000184187 82 ntBASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Gm42778-201ENSMUST00000199644 553 ntBASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav12-3A0A075B648 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Reep4-203ENSMUST00000226563 1444 ntBASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms