Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm11336-201ENSMUST00000118168 334 ntBASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm13474-201ENSMUST00000122466 815 ntBASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm10653-202ENSMUST00000139570 835 ntBASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm16061-201ENSMUST00000122167 857 ntBASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm7370-201ENSMUST00000219471 767 ntBASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.53□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15d-1-dv6d-1A0A075B624 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms