Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shroom3Q9QXN0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
Shroom3Q9QXN0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shroom3Q9QXN0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shroom3Q9QXN0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom3Q9QXN0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom3Q9QXN0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Shroom3Q9QXN0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shroom3Q9QXN0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom3Q9QXN0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom3Q9QXN0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.18■■□□□ 1.3
Shroom3Q9QXN0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom3Q9QXN0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom3Q9QXN0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom3Q9QXN0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
Shroom3Q9QXN0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shroom3Q9QXN0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom3Q9QXN0 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.17■■□□□ 1.3
Shroom3Q9QXN0 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.17■■□□□ 1.3
Shroom3Q9QXN0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.17■■□□□ 1.3
Shroom3Q9QXN0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.17■■□□□ 1.3
Shroom3Q9QXN0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom3Q9QXN0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Shroom3Q9QXN0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Shroom3Q9QXN0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Shroom3Q9QXN0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom3Q9QXN0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom3Q9QXN0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom3Q9QXN0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom3Q9QXN0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Shroom3Q9QXN0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom3Q9QXN0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shroom3Q9QXN0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Shroom3Q9QXN0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom3Q9QXN0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom3Q9QXN0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom3Q9QXN0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Shroom3Q9QXN0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.29
Shroom3Q9QXN0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Shroom3Q9QXN0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom3Q9QXN0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom3Q9QXN0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom3Q9QXN0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shroom3Q9QXN0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.12■■□□□ 1.29
Shroom3Q9QXN0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom3Q9QXN0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Shroom3Q9QXN0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom3Q9QXN0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.12■■□□□ 1.29
Shroom3Q9QXN0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom3Q9QXN0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom3Q9QXN0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Shroom3Q9QXN0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom3Q9QXN0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shroom3Q9QXN0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom3Q9QXN0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom3Q9QXN0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Shroom3Q9QXN0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom3Q9QXN0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom3Q9QXN0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Shroom3Q9QXN0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shroom3Q9QXN0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shroom3Q9QXN0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom3Q9QXN0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Shroom3Q9QXN0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.08■■□□□ 1.29
Shroom3Q9QXN0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Shroom3Q9QXN0 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.08■■□□□ 1.28
Shroom3Q9QXN0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Shroom3Q9QXN0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Shroom3Q9QXN0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Shroom3Q9QXN0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Shroom3Q9QXN0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Shroom3Q9QXN0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Shroom3Q9QXN0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Shroom3Q9QXN0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Shroom3Q9QXN0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.05■■□□□ 1.28
Shroom3Q9QXN0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Shroom3Q9QXN0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Shroom3Q9QXN0 Gm45364-201ENSMUST00000210883 159 ntBASIC23.04■■□□□ 1.28
Shroom3Q9QXN0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Shroom3Q9QXN0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Shroom3Q9QXN0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shroom3Q9QXN0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shroom3Q9QXN0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Shroom3Q9QXN0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Shroom3Q9QXN0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Shroom3Q9QXN0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Shroom3Q9QXN0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Shroom3Q9QXN0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23■■□□□ 1.27
Shroom3Q9QXN0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Shroom3Q9QXN0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23■■□□□ 1.27
Shroom3Q9QXN0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Shroom3Q9QXN0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Shroom3Q9QXN0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Shroom3Q9QXN0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.99■■□□□ 1.27
Shroom3Q9QXN0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Shroom3Q9QXN0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Shroom3Q9QXN0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Shroom3Q9QXN0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Shroom3Q9QXN0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Shroom3Q9QXN0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms