Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prg4Q9JM99 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prg4Q9JM99 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prg4Q9JM99 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prg4Q9JM99 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prg4Q9JM99 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prg4Q9JM99 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prg4Q9JM99 Scarna2-201ENSMUST00000157560 414 ntBASIC21.09■□□□□ 0.97
Prg4Q9JM99 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Prg4Q9JM99 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.09■□□□□ 0.97
Prg4Q9JM99 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prg4Q9JM99 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Prg4Q9JM99 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Prg4Q9JM99 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prg4Q9JM99 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prg4Q9JM99 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prg4Q9JM99 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.07■□□□□ 0.96
Prg4Q9JM99 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prg4Q9JM99 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Prg4Q9JM99 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prg4Q9JM99 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prg4Q9JM99 Gm11687-201ENSMUST00000118911 886 ntBASIC21.06■□□□□ 0.96
Prg4Q9JM99 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prg4Q9JM99 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Prg4Q9JM99 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prg4Q9JM99 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prg4Q9JM99 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.05■□□□□ 0.96
Prg4Q9JM99 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prg4Q9JM99 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Prg4Q9JM99 Terc-201ENSMUST00000082862 423 ntBASIC21.05■□□□□ 0.96
Prg4Q9JM99 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prg4Q9JM99 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prg4Q9JM99 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prg4Q9JM99 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.04■□□□□ 0.96
Prg4Q9JM99 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prg4Q9JM99 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.04■□□□□ 0.96
Prg4Q9JM99 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.03■□□□□ 0.96
Prg4Q9JM99 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prg4Q9JM99 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prg4Q9JM99 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prg4Q9JM99 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prg4Q9JM99 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prg4Q9JM99 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prg4Q9JM99 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.01■□□□□ 0.95
Prg4Q9JM99 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prg4Q9JM99 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prg4Q9JM99 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Prg4Q9JM99 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Prg4Q9JM99 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prg4Q9JM99 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Prg4Q9JM99 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.01■□□□□ 0.95
Prg4Q9JM99 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prg4Q9JM99 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prg4Q9JM99 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21■□□□□ 0.95
Prg4Q9JM99 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21■□□□□ 0.95
Prg4Q9JM99 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prg4Q9JM99 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prg4Q9JM99 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prg4Q9JM99 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prg4Q9JM99 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.99■□□□□ 0.95
Prg4Q9JM99 Gm16437-201ENSMUST00000025669 507 ntBASIC20.99■□□□□ 0.95
Prg4Q9JM99 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prg4Q9JM99 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prg4Q9JM99 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prg4Q9JM99 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prg4Q9JM99 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prg4Q9JM99 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prg4Q9JM99 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prg4Q9JM99 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prg4Q9JM99 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Prg4Q9JM99 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Prg4Q9JM99 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prg4Q9JM99 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.95■□□□□ 0.94
Prg4Q9JM99 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prg4Q9JM99 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prg4Q9JM99 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prg4Q9JM99 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prg4Q9JM99 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prg4Q9JM99 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prg4Q9JM99 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prg4Q9JM99 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prg4Q9JM99 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prg4Q9JM99 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prg4Q9JM99 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prg4Q9JM99 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Prg4Q9JM99 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prg4Q9JM99 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prg4Q9JM99 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.9■□□□□ 0.94
Prg4Q9JM99 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prg4Q9JM99 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prg4Q9JM99 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prg4Q9JM99 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prg4Q9JM99 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prg4Q9JM99 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prg4Q9JM99 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Prg4Q9JM99 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prg4Q9JM99 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prg4Q9JM99 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prg4Q9JM99 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prg4Q9JM99 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms