Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h8Q9JJ48 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zc3h8Q9JJ48 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.34■■□□□ 1.01
Zc3h8Q9JJ48 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3h8Q9JJ48 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3h8Q9JJ48 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3h8Q9JJ48 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3h8Q9JJ48 Scarna2-201ENSMUST00000157560 414 ntBASIC21.33■■□□□ 1.01
Zc3h8Q9JJ48 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3h8Q9JJ48 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3h8Q9JJ48 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.33■■□□□ 1
Zc3h8Q9JJ48 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Zc3h8Q9JJ48 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.33■■□□□ 1
Zc3h8Q9JJ48 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Zc3h8Q9JJ48 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.32■■□□□ 1
Zc3h8Q9JJ48 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3h8Q9JJ48 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3h8Q9JJ48 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3h8Q9JJ48 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3h8Q9JJ48 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.31■■□□□ 1
Zc3h8Q9JJ48 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3h8Q9JJ48 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.31■■□□□ 1
Zc3h8Q9JJ48 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3h8Q9JJ48 Gm9806-201ENSMUST00000051080 552 ntBASIC21.31■■□□□ 1
Zc3h8Q9JJ48 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3h8Q9JJ48 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.31■■□□□ 1
Zc3h8Q9JJ48 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.31■■□□□ 1
Zc3h8Q9JJ48 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3h8Q9JJ48 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.3■■□□□ 1
Zc3h8Q9JJ48 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Zc3h8Q9JJ48 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zc3h8Q9JJ48 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zc3h8Q9JJ48 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.29■■□□□ 1
Zc3h8Q9JJ48 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.28■■□□□ 1
Zc3h8Q9JJ48 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h8Q9JJ48 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.27■■□□□ 1
Zc3h8Q9JJ48 Gm11687-201ENSMUST00000118911 886 ntBASIC21.27■■□□□ 1
Zc3h8Q9JJ48 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.27■■□□□ 1
Zc3h8Q9JJ48 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.27■■□□□ 1
Zc3h8Q9JJ48 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h8Q9JJ48 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h8Q9JJ48 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h8Q9JJ48 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.24■□□□□ 0.99
Zc3h8Q9JJ48 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h8Q9JJ48 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h8Q9JJ48 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Zc3h8Q9JJ48 Gm16437-201ENSMUST00000025669 507 ntBASIC21.24■□□□□ 0.99
Zc3h8Q9JJ48 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h8Q9JJ48 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Zc3h8Q9JJ48 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Zc3h8Q9JJ48 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Zc3h8Q9JJ48 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h8Q9JJ48 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h8Q9JJ48 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Zc3h8Q9JJ48 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h8Q9JJ48 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h8Q9JJ48 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h8Q9JJ48 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.21■□□□□ 0.99
Zc3h8Q9JJ48 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h8Q9JJ48 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h8Q9JJ48 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h8Q9JJ48 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h8Q9JJ48 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h8Q9JJ48 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.19■□□□□ 0.98
Zc3h8Q9JJ48 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h8Q9JJ48 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h8Q9JJ48 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Zc3h8Q9JJ48 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h8Q9JJ48 Terc-201ENSMUST00000082862 423 ntBASIC21.18■□□□□ 0.98
Zc3h8Q9JJ48 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Zc3h8Q9JJ48 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3h8Q9JJ48 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.18■□□□□ 0.98
Zc3h8Q9JJ48 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3h8Q9JJ48 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h8Q9JJ48 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h8Q9JJ48 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h8Q9JJ48 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h8Q9JJ48 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h8Q9JJ48 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.16■□□□□ 0.98
Zc3h8Q9JJ48 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.16■□□□□ 0.98
Zc3h8Q9JJ48 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h8Q9JJ48 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h8Q9JJ48 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h8Q9JJ48 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h8Q9JJ48 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.15■□□□□ 0.98
Zc3h8Q9JJ48 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h8Q9JJ48 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h8Q9JJ48 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Zc3h8Q9JJ48 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Zc3h8Q9JJ48 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Zc3h8Q9JJ48 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Zc3h8Q9JJ48 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Zc3h8Q9JJ48 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Zc3h8Q9JJ48 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Zc3h8Q9JJ48 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Zc3h8Q9JJ48 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Zc3h8Q9JJ48 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h8Q9JJ48 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h8Q9JJ48 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h8Q9JJ48 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms