Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rbfox1Q9JJ43 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rbfox1Q9JJ43 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rbfox1Q9JJ43 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rbfox1Q9JJ43 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rbfox1Q9JJ43 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rbfox1Q9JJ43 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rbfox1Q9JJ43 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rbfox1Q9JJ43 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rbfox1Q9JJ43 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rbfox1Q9JJ43 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbfox1Q9JJ43 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbfox1Q9JJ43 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rbfox1Q9JJ43 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbfox1Q9JJ43 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rbfox1Q9JJ43 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbfox1Q9JJ43 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbfox1Q9JJ43 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rbfox1Q9JJ43 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbfox1Q9JJ43 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rbfox1Q9JJ43 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbfox1Q9JJ43 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbfox1Q9JJ43 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rbfox1Q9JJ43 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Rbfox1Q9JJ43 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Rbfox1Q9JJ43 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rbfox1Q9JJ43 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.43■□□□□ 0.7
Rbfox1Q9JJ43 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rbfox1Q9JJ43 Nkain2-201ENSMUST00000092602 558 ntBASIC19.43■□□□□ 0.7
Rbfox1Q9JJ43 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rbfox1Q9JJ43 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rbfox1Q9JJ43 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbfox1Q9JJ43 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbfox1Q9JJ43 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rbfox1Q9JJ43 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rbfox1Q9JJ43 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rbfox1Q9JJ43 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbfox1Q9JJ43 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbfox1Q9JJ43 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbfox1Q9JJ43 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rbfox1Q9JJ43 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rbfox1Q9JJ43 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.39■□□□□ 0.69
Rbfox1Q9JJ43 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rbfox1Q9JJ43 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbfox1Q9JJ43 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbfox1Q9JJ43 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbfox1Q9JJ43 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbfox1Q9JJ43 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbfox1Q9JJ43 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Gm37136-201ENSMUST00000194368 194 ntBASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rbfox1Q9JJ43 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rbfox1Q9JJ43 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rbfox1Q9JJ43 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbfox1Q9JJ43 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbfox1Q9JJ43 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rbfox1Q9JJ43 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbfox1Q9JJ43 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbfox1Q9JJ43 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.33■□□□□ 0.69
Rbfox1Q9JJ43 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rbfox1Q9JJ43 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rbfox1Q9JJ43 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rbfox1Q9JJ43 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rbfox1Q9JJ43 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.32■□□□□ 0.68
Rbfox1Q9JJ43 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.31■□□□□ 0.68
Rbfox1Q9JJ43 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbfox1Q9JJ43 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbfox1Q9JJ43 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rbfox1Q9JJ43 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.3■□□□□ 0.68
Rbfox1Q9JJ43 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbfox1Q9JJ43 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rbfox1Q9JJ43 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.3■□□□□ 0.68
Rbfox1Q9JJ43 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbfox1Q9JJ43 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rbfox1Q9JJ43 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rbfox1Q9JJ43 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rbfox1Q9JJ43 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbfox1Q9JJ43 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms