Protein–RNA interactions for Protein: Q9ER62

Tnfrsf22, Tumor necrosis factor receptor superfamily member 22, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf22Q9ER62 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf22Q9ER62 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf22Q9ER62 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf22Q9ER62 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.53■■□□□ 1.04
Tnfrsf22Q9ER62 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf22Q9ER62 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf22Q9ER62 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.52■■□□□ 1.04
Tnfrsf22Q9ER62 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf22Q9ER62 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf22Q9ER62 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf22Q9ER62 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Tnfrsf22Q9ER62 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf22Q9ER62 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.51■■□□□ 1.03
Tnfrsf22Q9ER62 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.5■■□□□ 1.03
Tnfrsf22Q9ER62 Gm27502-201ENSMUST00000183495 199 ntBASIC21.5■■□□□ 1.03
Tnfrsf22Q9ER62 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Tnfrsf22Q9ER62 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf22Q9ER62 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfrsf22Q9ER62 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfrsf22Q9ER62 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfrsf22Q9ER62 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfrsf22Q9ER62 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfrsf22Q9ER62 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.48■■□□□ 1.03
Tnfrsf22Q9ER62 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf22Q9ER62 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf22Q9ER62 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf22Q9ER62 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf22Q9ER62 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.47■■□□□ 1.03
Tnfrsf22Q9ER62 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.47■■□□□ 1.03
Tnfrsf22Q9ER62 Gm9812-201ENSMUST00000061934 968 ntBASIC21.47■■□□□ 1.03
Tnfrsf22Q9ER62 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf22Q9ER62 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Tnfrsf22Q9ER62 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf22Q9ER62 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Tnfrsf22Q9ER62 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf22Q9ER62 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf22Q9ER62 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf22Q9ER62 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf22Q9ER62 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Tnfrsf22Q9ER62 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.45■■□□□ 1.02
Tnfrsf22Q9ER62 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf22Q9ER62 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf22Q9ER62 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf22Q9ER62 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf22Q9ER62 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Tnfrsf22Q9ER62 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf22Q9ER62 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf22Q9ER62 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Tnfrsf22Q9ER62 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.42■■□□□ 1.02
Tnfrsf22Q9ER62 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Tnfrsf22Q9ER62 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.42■■□□□ 1.02
Tnfrsf22Q9ER62 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf22Q9ER62 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.42■■□□□ 1.02
Tnfrsf22Q9ER62 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf22Q9ER62 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf22Q9ER62 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.41■■□□□ 1.02
Tnfrsf22Q9ER62 Gm12366-201ENSMUST00000121722 873 ntBASIC21.41■■□□□ 1.02
Tnfrsf22Q9ER62 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.41■■□□□ 1.02
Tnfrsf22Q9ER62 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.41■■□□□ 1.02
Tnfrsf22Q9ER62 Gm5786-201ENSMUST00000085368 882 ntBASIC21.41■■□□□ 1.02
Tnfrsf22Q9ER62 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.4■■□□□ 1.02
Tnfrsf22Q9ER62 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf22Q9ER62 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tnfrsf22Q9ER62 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnfrsf22Q9ER62 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.38■■□□□ 1.01
Tnfrsf22Q9ER62 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.38■■□□□ 1.01
Tnfrsf22Q9ER62 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf22Q9ER62 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf22Q9ER62 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf22Q9ER62 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf22Q9ER62 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf22Q9ER62 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf22Q9ER62 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf22Q9ER62 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Tnfrsf22Q9ER62 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf22Q9ER62 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Tnfrsf22Q9ER62 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf22Q9ER62 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf22Q9ER62 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf22Q9ER62 Terc-201ENSMUST00000082862 423 ntBASIC21.35■■□□□ 1.01
Tnfrsf22Q9ER62 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf22Q9ER62 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf22Q9ER62 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf22Q9ER62 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.34■■□□□ 1.01
Tnfrsf22Q9ER62 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf22Q9ER62 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf22Q9ER62 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf22Q9ER62 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf22Q9ER62 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tnfrsf22Q9ER62 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.32■■□□□ 1
Tnfrsf22Q9ER62 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.32■■□□□ 1
Tnfrsf22Q9ER62 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Tnfrsf22Q9ER62 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tnfrsf22Q9ER62 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf22Q9ER62 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf22Q9ER62 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.31■■□□□ 1
Tnfrsf22Q9ER62 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf22Q9ER62 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf22Q9ER62 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Tnfrsf22Q9ER62 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms