Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr3Q9DCF9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr3Q9DCF9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssr3Q9DCF9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ssr3Q9DCF9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ssr3Q9DCF9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ssr3Q9DCF9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ssr3Q9DCF9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.53■□□□□ 0.88
Ssr3Q9DCF9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ssr3Q9DCF9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ssr3Q9DCF9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr3Q9DCF9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr3Q9DCF9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr3Q9DCF9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ssr3Q9DCF9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr3Q9DCF9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr3Q9DCF9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ssr3Q9DCF9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ssr3Q9DCF9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ssr3Q9DCF9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ssr3Q9DCF9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Ssr3Q9DCF9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ssr3Q9DCF9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr3Q9DCF9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr3Q9DCF9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr3Q9DCF9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr3Q9DCF9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr3Q9DCF9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssr3Q9DCF9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssr3Q9DCF9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ssr3Q9DCF9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssr3Q9DCF9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ssr3Q9DCF9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.47■□□□□ 0.87
Ssr3Q9DCF9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr3Q9DCF9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr3Q9DCF9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr3Q9DCF9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr3Q9DCF9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr3Q9DCF9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr3Q9DCF9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr3Q9DCF9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ssr3Q9DCF9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr3Q9DCF9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr3Q9DCF9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr3Q9DCF9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ssr3Q9DCF9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ssr3Q9DCF9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ssr3Q9DCF9 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.45■□□□□ 0.86
Ssr3Q9DCF9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ssr3Q9DCF9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.45■□□□□ 0.86
Ssr3Q9DCF9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ssr3Q9DCF9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssr3Q9DCF9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ssr3Q9DCF9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.44■□□□□ 0.86
Ssr3Q9DCF9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ssr3Q9DCF9 Gm26115-201ENSMUST00000175605 87 ntBASIC20.43■□□□□ 0.86
Ssr3Q9DCF9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ssr3Q9DCF9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ssr3Q9DCF9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ssr3Q9DCF9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ssr3Q9DCF9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ssr3Q9DCF9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssr3Q9DCF9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssr3Q9DCF9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ssr3Q9DCF9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssr3Q9DCF9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ssr3Q9DCF9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ssr3Q9DCF9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssr3Q9DCF9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssr3Q9DCF9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssr3Q9DCF9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Ssr3Q9DCF9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.41■□□□□ 0.86
Ssr3Q9DCF9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ssr3Q9DCF9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssr3Q9DCF9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ssr3Q9DCF9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ssr3Q9DCF9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ssr3Q9DCF9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ssr3Q9DCF9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ssr3Q9DCF9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ssr3Q9DCF9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ssr3Q9DCF9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ssr3Q9DCF9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssr3Q9DCF9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssr3Q9DCF9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ssr3Q9DCF9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ssr3Q9DCF9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.38■□□□□ 0.85
Ssr3Q9DCF9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssr3Q9DCF9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ssr3Q9DCF9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr3Q9DCF9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr3Q9DCF9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ssr3Q9DCF9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.37■□□□□ 0.85
Ssr3Q9DCF9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr3Q9DCF9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.36■□□□□ 0.85
Ssr3Q9DCF9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssr3Q9DCF9 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.35■□□□□ 0.85
Ssr3Q9DCF9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssr3Q9DCF9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ssr3Q9DCF9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms