Protein–RNA interactions for Protein: Q9CQJ4

Rnf2, E3 ubiquitin-protein ligase RING2, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf2Q9CQJ4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf2Q9CQJ4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf2Q9CQJ4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf2Q9CQJ4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf2Q9CQJ4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf2Q9CQJ4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf2Q9CQJ4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf2Q9CQJ4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf2Q9CQJ4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf2Q9CQJ4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf2Q9CQJ4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf2Q9CQJ4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf2Q9CQJ4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf2Q9CQJ4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rnf2Q9CQJ4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf2Q9CQJ4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rnf2Q9CQJ4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf2Q9CQJ4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.24■□□□□ 0.51
Rnf2Q9CQJ4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rnf2Q9CQJ4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf2Q9CQJ4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf2Q9CQJ4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf2Q9CQJ4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rnf2Q9CQJ4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.22■□□□□ 0.51
Rnf2Q9CQJ4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf2Q9CQJ4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.22■□□□□ 0.51
Rnf2Q9CQJ4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf2Q9CQJ4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Rnf2Q9CQJ4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf2Q9CQJ4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf2Q9CQJ4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rnf2Q9CQJ4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf2Q9CQJ4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rnf2Q9CQJ4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf2Q9CQJ4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rnf2Q9CQJ4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.2■□□□□ 0.5
Rnf2Q9CQJ4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf2Q9CQJ4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf2Q9CQJ4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf2Q9CQJ4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf2Q9CQJ4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rnf2Q9CQJ4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf2Q9CQJ4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rnf2Q9CQJ4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf2Q9CQJ4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rnf2Q9CQJ4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf2Q9CQJ4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf2Q9CQJ4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf2Q9CQJ4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Rnf2Q9CQJ4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Rnf2Q9CQJ4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf2Q9CQJ4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf2Q9CQJ4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rnf2Q9CQJ4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf2Q9CQJ4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf2Q9CQJ4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf2Q9CQJ4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf2Q9CQJ4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf2Q9CQJ4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rnf2Q9CQJ4 Particl-201ENSMUST00000205370 1560 ntBASIC18.16■□□□□ 0.5
Rnf2Q9CQJ4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf2Q9CQJ4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.15■□□□□ 0.5
Rnf2Q9CQJ4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf2Q9CQJ4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Rnf2Q9CQJ4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf2Q9CQJ4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.5
Rnf2Q9CQJ4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf2Q9CQJ4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf2Q9CQJ4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf2Q9CQJ4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf2Q9CQJ4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf2Q9CQJ4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rnf2Q9CQJ4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf2Q9CQJ4 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.14■□□□□ 0.49
Rnf2Q9CQJ4 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.14■□□□□ 0.49
Rnf2Q9CQJ4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf2Q9CQJ4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf2Q9CQJ4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf2Q9CQJ4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf2Q9CQJ4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rnf2Q9CQJ4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf2Q9CQJ4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf2Q9CQJ4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rnf2Q9CQJ4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf2Q9CQJ4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf2Q9CQJ4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf2Q9CQJ4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Rnf2Q9CQJ4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf2Q9CQJ4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rnf2Q9CQJ4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rnf2Q9CQJ4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf2Q9CQJ4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
Rnf2Q9CQJ4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf2Q9CQJ4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf2Q9CQJ4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.07■□□□□ 0.48
Rnf2Q9CQJ4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf2Q9CQJ4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf2Q9CQJ4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf2Q9CQJ4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf2Q9CQJ4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms