Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.47■□□□□ 0.39
Chchd1Q9CQA6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Chchd1Q9CQA6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chchd1Q9CQA6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chchd1Q9CQA6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chchd1Q9CQA6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chchd1Q9CQA6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chchd1Q9CQA6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chchd1Q9CQA6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chchd1Q9CQA6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chchd1Q9CQA6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chchd1Q9CQA6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chchd1Q9CQA6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chchd1Q9CQA6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chchd1Q9CQA6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chchd1Q9CQA6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Chchd1Q9CQA6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chchd1Q9CQA6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chchd1Q9CQA6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.45■□□□□ 0.38
Chchd1Q9CQA6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chchd1Q9CQA6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Chchd1Q9CQA6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chchd1Q9CQA6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chchd1Q9CQA6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chchd1Q9CQA6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chchd1Q9CQA6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chchd1Q9CQA6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chchd1Q9CQA6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chchd1Q9CQA6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chchd1Q9CQA6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chchd1Q9CQA6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chchd1Q9CQA6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chchd1Q9CQA6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chchd1Q9CQA6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chchd1Q9CQA6 Notumos-201ENSMUST00000151998 2659 ntBASIC17.42■□□□□ 0.38
Chchd1Q9CQA6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chchd1Q9CQA6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chchd1Q9CQA6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chchd1Q9CQA6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chchd1Q9CQA6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chchd1Q9CQA6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chchd1Q9CQA6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chchd1Q9CQA6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chchd1Q9CQA6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chchd1Q9CQA6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.39■□□□□ 0.37
Chchd1Q9CQA6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chchd1Q9CQA6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chchd1Q9CQA6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Chchd1Q9CQA6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chchd1Q9CQA6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Chchd1Q9CQA6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chchd1Q9CQA6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chchd1Q9CQA6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chchd1Q9CQA6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chchd1Q9CQA6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chchd1Q9CQA6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chchd1Q9CQA6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chchd1Q9CQA6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.37■□□□□ 0.37
Chchd1Q9CQA6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chchd1Q9CQA6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chchd1Q9CQA6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chchd1Q9CQA6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chchd1Q9CQA6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.36■□□□□ 0.37
Chchd1Q9CQA6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chchd1Q9CQA6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Chchd1Q9CQA6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chchd1Q9CQA6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chchd1Q9CQA6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Chchd1Q9CQA6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chchd1Q9CQA6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chchd1Q9CQA6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Chchd1Q9CQA6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chchd1Q9CQA6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chchd1Q9CQA6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chchd1Q9CQA6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chchd1Q9CQA6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.33■□□□□ 0.37
Chchd1Q9CQA6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chchd1Q9CQA6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chchd1Q9CQA6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chchd1Q9CQA6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Chchd1Q9CQA6 Rab21-202ENSMUST00000218831 843 ntBASIC17.33■□□□□ 0.36
Chchd1Q9CQA6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chchd1Q9CQA6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Chchd1Q9CQA6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chchd1Q9CQA6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chchd1Q9CQA6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.32■□□□□ 0.36
Chchd1Q9CQA6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chchd1Q9CQA6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chchd1Q9CQA6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chchd1Q9CQA6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.31■□□□□ 0.36
Chchd1Q9CQA6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chchd1Q9CQA6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Chchd1Q9CQA6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chchd1Q9CQA6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chchd1Q9CQA6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chchd1Q9CQA6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chchd1Q9CQA6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chchd1Q9CQA6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chchd1Q9CQA6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Chchd1Q9CQA6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms