Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdha9Q91Y11 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdha9Q91Y11 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdha9Q91Y11 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.55■■□□□ 1.52
Pcdha9Q91Y11 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha9Q91Y11 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdha9Q91Y11 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdha9Q91Y11 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdha9Q91Y11 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdha9Q91Y11 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdha9Q91Y11 Mir3960-201ENSMUST00000198213 73 ntBASIC24.54■■□□□ 1.52
Pcdha9Q91Y11 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.53■■□□□ 1.52
Pcdha9Q91Y11 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdha9Q91Y11 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdha9Q91Y11 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Pcdha9Q91Y11 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdha9Q91Y11 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdha9Q91Y11 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.51■■□□□ 1.51
Pcdha9Q91Y11 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdha9Q91Y11 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Pcdha9Q91Y11 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha9Q91Y11 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.5■■□□□ 1.51
Pcdha9Q91Y11 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha9Q91Y11 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdha9Q91Y11 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdha9Q91Y11 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.49■■□□□ 1.51
Pcdha9Q91Y11 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdha9Q91Y11 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdha9Q91Y11 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.48■■□□□ 1.51
Pcdha9Q91Y11 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdha9Q91Y11 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdha9Q91Y11 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdha9Q91Y11 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdha9Q91Y11 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Pcdha9Q91Y11 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.46■■□□□ 1.51
Pcdha9Q91Y11 Gm9812-201ENSMUST00000061934 968 ntBASIC24.46■■□□□ 1.51
Pcdha9Q91Y11 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdha9Q91Y11 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Pcdha9Q91Y11 Gm45364-201ENSMUST00000210883 159 ntBASIC24.45■■□□□ 1.5
Pcdha9Q91Y11 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdha9Q91Y11 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdha9Q91Y11 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdha9Q91Y11 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdha9Q91Y11 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdha9Q91Y11 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdha9Q91Y11 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdha9Q91Y11 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdha9Q91Y11 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdha9Q91Y11 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdha9Q91Y11 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.42■■□□□ 1.5
Pcdha9Q91Y11 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdha9Q91Y11 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdha9Q91Y11 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Pcdha9Q91Y11 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdha9Q91Y11 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.41■■□□□ 1.5
Pcdha9Q91Y11 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdha9Q91Y11 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Pcdha9Q91Y11 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.4■■□□□ 1.5
Pcdha9Q91Y11 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdha9Q91Y11 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Pcdha9Q91Y11 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.39■■□□□ 1.49
Pcdha9Q91Y11 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.39■■□□□ 1.49
Pcdha9Q91Y11 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.39■■□□□ 1.49
Pcdha9Q91Y11 Gm6311-201ENSMUST00000073790 878 ntBASIC24.39■■□□□ 1.49
Pcdha9Q91Y11 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdha9Q91Y11 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdha9Q91Y11 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdha9Q91Y11 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdha9Q91Y11 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdha9Q91Y11 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdha9Q91Y11 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.37■■□□□ 1.49
Pcdha9Q91Y11 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdha9Q91Y11 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdha9Q91Y11 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Pcdha9Q91Y11 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.36■■□□□ 1.49
Pcdha9Q91Y11 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdha9Q91Y11 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Pcdha9Q91Y11 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdha9Q91Y11 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdha9Q91Y11 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdha9Q91Y11 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdha9Q91Y11 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.35■■□□□ 1.49
Pcdha9Q91Y11 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdha9Q91Y11 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdha9Q91Y11 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.35■■□□□ 1.49
Pcdha9Q91Y11 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Pcdha9Q91Y11 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdha9Q91Y11 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.34■■□□□ 1.49
Pcdha9Q91Y11 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdha9Q91Y11 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdha9Q91Y11 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdha9Q91Y11 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.33■■□□□ 1.49
Pcdha9Q91Y11 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
Pcdha9Q91Y11 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdha9Q91Y11 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Pcdha9Q91Y11 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdha9Q91Y11 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdha9Q91Y11 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdha9Q91Y11 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdha9Q91Y11 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms