Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdhgc5Q91XW9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdhgc5Q91XW9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdhgc5Q91XW9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhgc5Q91XW9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhgc5Q91XW9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdhgc5Q91XW9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Pcdhgc5Q91XW9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhgc5Q91XW9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhgc5Q91XW9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhgc5Q91XW9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhgc5Q91XW9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhgc5Q91XW9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.22■■□□□ 1.79
Pcdhgc5Q91XW9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhgc5Q91XW9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhgc5Q91XW9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhgc5Q91XW9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhgc5Q91XW9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Pcdhgc5Q91XW9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhgc5Q91XW9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.21■■□□□ 1.79
Pcdhgc5Q91XW9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhgc5Q91XW9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhgc5Q91XW9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Pcdhgc5Q91XW9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Pcdhgc5Q91XW9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Pcdhgc5Q91XW9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhgc5Q91XW9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhgc5Q91XW9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.19■■□□□ 1.78
Pcdhgc5Q91XW9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdhgc5Q91XW9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhgc5Q91XW9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhgc5Q91XW9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhgc5Q91XW9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhgc5Q91XW9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhgc5Q91XW9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhgc5Q91XW9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhgc5Q91XW9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhgc5Q91XW9 Gm37136-201ENSMUST00000194368 194 ntBASIC26.14■■□□□ 1.78
Pcdhgc5Q91XW9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhgc5Q91XW9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.12■■□□□ 1.77
Pcdhgc5Q91XW9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhgc5Q91XW9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.11■■□□□ 1.77
Pcdhgc5Q91XW9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Pcdhgc5Q91XW9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.1■■□□□ 1.77
Pcdhgc5Q91XW9 Gm14523-201ENSMUST00000117260 558 ntBASIC26.1■■□□□ 1.77
Pcdhgc5Q91XW9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhgc5Q91XW9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Pcdhgc5Q91XW9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhgc5Q91XW9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhgc5Q91XW9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhgc5Q91XW9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhgc5Q91XW9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdhgc5Q91XW9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Pcdhgc5Q91XW9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdhgc5Q91XW9 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.07■■□□□ 1.76
Pcdhgc5Q91XW9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhgc5Q91XW9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhgc5Q91XW9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhgc5Q91XW9 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.06■■□□□ 1.76
Pcdhgc5Q91XW9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhgc5Q91XW9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Pcdhgc5Q91XW9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhgc5Q91XW9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.04■■□□□ 1.76
Pcdhgc5Q91XW9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhgc5Q91XW9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhgc5Q91XW9 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.04■■□□□ 1.76
Pcdhgc5Q91XW9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhgc5Q91XW9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhgc5Q91XW9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.03■■□□□ 1.76
Pcdhgc5Q91XW9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhgc5Q91XW9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Pcdhgc5Q91XW9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhgc5Q91XW9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhgc5Q91XW9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhgc5Q91XW9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdhgc5Q91XW9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Pcdhgc5Q91XW9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Pcdhgc5Q91XW9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdhgc5Q91XW9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdhgc5Q91XW9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
Pcdhgc5Q91XW9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhgc5Q91XW9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Pcdhgc5Q91XW9 Gm9910-201ENSMUST00000195385 1550 ntBASIC25.99■■□□□ 1.75
Pcdhgc5Q91XW9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdhgc5Q91XW9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Pcdhgc5Q91XW9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.98■■□□□ 1.75
Pcdhgc5Q91XW9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdhgc5Q91XW9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdhgc5Q91XW9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25.97■■□□□ 1.75
Pcdhgc5Q91XW9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25.96■■□□□ 1.75
Pcdhgc5Q91XW9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhgc5Q91XW9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhgc5Q91XW9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdhgc5Q91XW9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdhgc5Q91XW9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdhgc5Q91XW9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdhgc5Q91XW9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhgc5Q91XW9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Pcdhgc5Q91XW9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhgc5Q91XW9 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.94■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms