Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tm6sf2Q8R1J1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tm6sf2Q8R1J1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tm6sf2Q8R1J1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tm6sf2Q8R1J1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tm6sf2Q8R1J1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tm6sf2Q8R1J1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.57■■□□□ 1.04
Tm6sf2Q8R1J1 Scarna2-201ENSMUST00000157560 414 ntBASIC21.57■■□□□ 1.04
Tm6sf2Q8R1J1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tm6sf2Q8R1J1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Tm6sf2Q8R1J1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tm6sf2Q8R1J1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.56■■□□□ 1.04
Tm6sf2Q8R1J1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.56■■□□□ 1.04
Tm6sf2Q8R1J1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tm6sf2Q8R1J1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tm6sf2Q8R1J1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tm6sf2Q8R1J1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tm6sf2Q8R1J1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tm6sf2Q8R1J1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tm6sf2Q8R1J1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tm6sf2Q8R1J1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tm6sf2Q8R1J1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tm6sf2Q8R1J1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.54■■□□□ 1.04
Tm6sf2Q8R1J1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tm6sf2Q8R1J1 Gm9812-201ENSMUST00000061934 968 ntBASIC21.54■■□□□ 1.04
Tm6sf2Q8R1J1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tm6sf2Q8R1J1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Tm6sf2Q8R1J1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tm6sf2Q8R1J1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Tm6sf2Q8R1J1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.53■■□□□ 1.04
Tm6sf2Q8R1J1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.53■■□□□ 1.04
Tm6sf2Q8R1J1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tm6sf2Q8R1J1 Gm9806-201ENSMUST00000051080 552 ntBASIC21.53■■□□□ 1.04
Tm6sf2Q8R1J1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tm6sf2Q8R1J1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.53■■□□□ 1.04
Tm6sf2Q8R1J1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Tm6sf2Q8R1J1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Tm6sf2Q8R1J1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tm6sf2Q8R1J1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Tm6sf2Q8R1J1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Tm6sf2Q8R1J1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Tm6sf2Q8R1J1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Tm6sf2Q8R1J1 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.51■■□□□ 1.03
Tm6sf2Q8R1J1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tm6sf2Q8R1J1 Gm11687-201ENSMUST00000118911 886 ntBASIC21.5■■□□□ 1.03
Tm6sf2Q8R1J1 Gm16437-201ENSMUST00000025669 507 ntBASIC21.5■■□□□ 1.03
Tm6sf2Q8R1J1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Tm6sf2Q8R1J1 Mir6538-201ENSMUST00000183713 110 ntBASIC21.49■■□□□ 1.03
Tm6sf2Q8R1J1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tm6sf2Q8R1J1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tm6sf2Q8R1J1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.48■■□□□ 1.03
Tm6sf2Q8R1J1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tm6sf2Q8R1J1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tm6sf2Q8R1J1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Tm6sf2Q8R1J1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tm6sf2Q8R1J1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tm6sf2Q8R1J1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tm6sf2Q8R1J1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Tm6sf2Q8R1J1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.46■■□□□ 1.03
Tm6sf2Q8R1J1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.46■■□□□ 1.03
Tm6sf2Q8R1J1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.03
Tm6sf2Q8R1J1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Tm6sf2Q8R1J1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tm6sf2Q8R1J1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Tm6sf2Q8R1J1 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.44■■□□□ 1.02
Tm6sf2Q8R1J1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tm6sf2Q8R1J1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tm6sf2Q8R1J1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tm6sf2Q8R1J1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tm6sf2Q8R1J1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tm6sf2Q8R1J1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.42■■□□□ 1.02
Tm6sf2Q8R1J1 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.42■■□□□ 1.02
Tm6sf2Q8R1J1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tm6sf2Q8R1J1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Tm6sf2Q8R1J1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tm6sf2Q8R1J1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tm6sf2Q8R1J1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tm6sf2Q8R1J1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tm6sf2Q8R1J1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Tm6sf2Q8R1J1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tm6sf2Q8R1J1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Tm6sf2Q8R1J1 Terc-201ENSMUST00000082862 423 ntBASIC21.39■■□□□ 1.01
Tm6sf2Q8R1J1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.39■■□□□ 1.01
Tm6sf2Q8R1J1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf2Q8R1J1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.38■■□□□ 1.01
Tm6sf2Q8R1J1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf2Q8R1J1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
Tm6sf2Q8R1J1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf2Q8R1J1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf2Q8R1J1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tm6sf2Q8R1J1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Tm6sf2Q8R1J1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.38■■□□□ 1.01
Tm6sf2Q8R1J1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf2Q8R1J1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf2Q8R1J1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tm6sf2Q8R1J1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Tm6sf2Q8R1J1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf2Q8R1J1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf2Q8R1J1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf2Q8R1J1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms