Protein–RNA interactions for Protein: Q8R1B8

Rorb, Nuclear receptor ROR-beta, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RorbQ8R1B8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RorbQ8R1B8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RorbQ8R1B8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RorbQ8R1B8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RorbQ8R1B8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RorbQ8R1B8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RorbQ8R1B8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RorbQ8R1B8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RorbQ8R1B8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RorbQ8R1B8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
RorbQ8R1B8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RorbQ8R1B8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.2■□□□□ 0.98
RorbQ8R1B8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.2■□□□□ 0.98
RorbQ8R1B8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RorbQ8R1B8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RorbQ8R1B8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RorbQ8R1B8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.19■□□□□ 0.98
RorbQ8R1B8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RorbQ8R1B8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RorbQ8R1B8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.18■□□□□ 0.98
RorbQ8R1B8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RorbQ8R1B8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RorbQ8R1B8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.17■□□□□ 0.98
RorbQ8R1B8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RorbQ8R1B8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
RorbQ8R1B8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RorbQ8R1B8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RorbQ8R1B8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RorbQ8R1B8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RorbQ8R1B8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RorbQ8R1B8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RorbQ8R1B8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RorbQ8R1B8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RorbQ8R1B8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RorbQ8R1B8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RorbQ8R1B8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RorbQ8R1B8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RorbQ8R1B8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RorbQ8R1B8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RorbQ8R1B8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RorbQ8R1B8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RorbQ8R1B8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RorbQ8R1B8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RorbQ8R1B8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RorbQ8R1B8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RorbQ8R1B8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RorbQ8R1B8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RorbQ8R1B8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RorbQ8R1B8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RorbQ8R1B8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RorbQ8R1B8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RorbQ8R1B8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RorbQ8R1B8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RorbQ8R1B8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RorbQ8R1B8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RorbQ8R1B8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RorbQ8R1B8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
RorbQ8R1B8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RorbQ8R1B8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RorbQ8R1B8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RorbQ8R1B8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RorbQ8R1B8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RorbQ8R1B8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RorbQ8R1B8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RorbQ8R1B8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RorbQ8R1B8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RorbQ8R1B8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RorbQ8R1B8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RorbQ8R1B8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RorbQ8R1B8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RorbQ8R1B8 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.08■□□□□ 0.96
RorbQ8R1B8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RorbQ8R1B8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RorbQ8R1B8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RorbQ8R1B8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RorbQ8R1B8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RorbQ8R1B8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RorbQ8R1B8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.05■□□□□ 0.96
RorbQ8R1B8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RorbQ8R1B8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RorbQ8R1B8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RorbQ8R1B8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RorbQ8R1B8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RorbQ8R1B8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RorbQ8R1B8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RorbQ8R1B8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RorbQ8R1B8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RorbQ8R1B8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RorbQ8R1B8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RorbQ8R1B8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RorbQ8R1B8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
RorbQ8R1B8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RorbQ8R1B8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RorbQ8R1B8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.03■□□□□ 0.96
RorbQ8R1B8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.03■□□□□ 0.96
RorbQ8R1B8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RorbQ8R1B8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RorbQ8R1B8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RorbQ8R1B8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RorbQ8R1B8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms