Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Smc4Q8CG47 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Smc4Q8CG47 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Smc4Q8CG47 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.51■■■□□ 2.15
Smc4Q8CG47 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.51■■■□□ 2.15
Smc4Q8CG47 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Smc4Q8CG47 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Smc4Q8CG47 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Smc4Q8CG47 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC28.5■■■□□ 2.15
Smc4Q8CG47 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Smc4Q8CG47 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28.5■■■□□ 2.15
Smc4Q8CG47 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.5■■■□□ 2.15
Smc4Q8CG47 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Smc4Q8CG47 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
Smc4Q8CG47 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Smc4Q8CG47 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Smc4Q8CG47 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Smc4Q8CG47 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
Smc4Q8CG47 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Smc4Q8CG47 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Smc4Q8CG47 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Smc4Q8CG47 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Smc4Q8CG47 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.46■■■□□ 2.15
Smc4Q8CG47 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Smc4Q8CG47 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Smc4Q8CG47 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Smc4Q8CG47 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
Smc4Q8CG47 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Smc4Q8CG47 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Smc4Q8CG47 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Smc4Q8CG47 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
Smc4Q8CG47 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Smc4Q8CG47 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
Smc4Q8CG47 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Smc4Q8CG47 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
Smc4Q8CG47 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Smc4Q8CG47 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Smc4Q8CG47 Terc-201ENSMUST00000082862 423 ntBASIC28.43■■■□□ 2.14
Smc4Q8CG47 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Smc4Q8CG47 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Smc4Q8CG47 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Smc4Q8CG47 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Smc4Q8CG47 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC28.42■■■□□ 2.14
Smc4Q8CG47 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Smc4Q8CG47 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Smc4Q8CG47 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Smc4Q8CG47 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Smc4Q8CG47 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Smc4Q8CG47 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Smc4Q8CG47 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Smc4Q8CG47 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Smc4Q8CG47 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC28.38■■■□□ 2.13
Smc4Q8CG47 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC28.38■■■□□ 2.13
Smc4Q8CG47 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Smc4Q8CG47 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.36■■■□□ 2.13
Smc4Q8CG47 Gm12366-201ENSMUST00000121722 873 ntBASIC28.36■■■□□ 2.13
Smc4Q8CG47 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.36■■■□□ 2.13
Smc4Q8CG47 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.36■■■□□ 2.13
Smc4Q8CG47 Gm5786-201ENSMUST00000085368 882 ntBASIC28.36■■■□□ 2.13
Smc4Q8CG47 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.36■■■□□ 2.13
Smc4Q8CG47 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Smc4Q8CG47 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Smc4Q8CG47 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Smc4Q8CG47 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Smc4Q8CG47 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.35■■■□□ 2.13
Smc4Q8CG47 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Smc4Q8CG47 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC28.34■■■□□ 2.13
Smc4Q8CG47 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Smc4Q8CG47 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Smc4Q8CG47 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Smc4Q8CG47 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC28.33■■■□□ 2.13
Smc4Q8CG47 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Smc4Q8CG47 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Smc4Q8CG47 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Smc4Q8CG47 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Smc4Q8CG47 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.31■■■□□ 2.12
Smc4Q8CG47 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Smc4Q8CG47 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Smc4Q8CG47 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Smc4Q8CG47 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Smc4Q8CG47 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
Smc4Q8CG47 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Smc4Q8CG47 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Smc4Q8CG47 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Smc4Q8CG47 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
Smc4Q8CG47 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Smc4Q8CG47 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Smc4Q8CG47 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC28.26■■■□□ 2.11
Smc4Q8CG47 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Smc4Q8CG47 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Smc4Q8CG47 Gm27502-201ENSMUST00000183495 199 ntBASIC28.25■■■□□ 2.11
Smc4Q8CG47 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Smc4Q8CG47 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Smc4Q8CG47 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Smc4Q8CG47 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Smc4Q8CG47 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Smc4Q8CG47 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC28.24■■■□□ 2.11
Smc4Q8CG47 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Smc4Q8CG47 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Smc4Q8CG47 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms