Protein–RNA interactions for Protein: Q8C8M1

Sinhcaf, SIN3-HDAC complex-associated factor, mousemouse

Known RBP Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SinhcafQ8C8M1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SinhcafQ8C8M1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SinhcafQ8C8M1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SinhcafQ8C8M1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SinhcafQ8C8M1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SinhcafQ8C8M1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SinhcafQ8C8M1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SinhcafQ8C8M1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SinhcafQ8C8M1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SinhcafQ8C8M1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SinhcafQ8C8M1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.04■■□□□ 1.12
SinhcafQ8C8M1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SinhcafQ8C8M1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SinhcafQ8C8M1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SinhcafQ8C8M1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.03■■□□□ 1.12
SinhcafQ8C8M1 Cap2-205ENSMUST00000225824 1634 ntBASIC22.02■■□□□ 1.12
SinhcafQ8C8M1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SinhcafQ8C8M1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SinhcafQ8C8M1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.02■■□□□ 1.12
SinhcafQ8C8M1 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.02■■□□□ 1.12
SinhcafQ8C8M1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SinhcafQ8C8M1 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.02■■□□□ 1.12
SinhcafQ8C8M1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SinhcafQ8C8M1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
SinhcafQ8C8M1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SinhcafQ8C8M1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
SinhcafQ8C8M1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SinhcafQ8C8M1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22■■□□□ 1.11
SinhcafQ8C8M1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SinhcafQ8C8M1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22■■□□□ 1.11
SinhcafQ8C8M1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22■■□□□ 1.11
SinhcafQ8C8M1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SinhcafQ8C8M1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SinhcafQ8C8M1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
SinhcafQ8C8M1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.98■■□□□ 1.11
SinhcafQ8C8M1 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.98■■□□□ 1.11
SinhcafQ8C8M1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SinhcafQ8C8M1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SinhcafQ8C8M1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SinhcafQ8C8M1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SinhcafQ8C8M1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SinhcafQ8C8M1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SinhcafQ8C8M1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SinhcafQ8C8M1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SinhcafQ8C8M1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SinhcafQ8C8M1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SinhcafQ8C8M1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SinhcafQ8C8M1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SinhcafQ8C8M1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.96■■□□□ 1.11
SinhcafQ8C8M1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SinhcafQ8C8M1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SinhcafQ8C8M1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.96■■□□□ 1.11
SinhcafQ8C8M1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SinhcafQ8C8M1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SinhcafQ8C8M1 Terc-201ENSMUST00000082862 423 ntBASIC21.95■■□□□ 1.1
SinhcafQ8C8M1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SinhcafQ8C8M1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SinhcafQ8C8M1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SinhcafQ8C8M1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SinhcafQ8C8M1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SinhcafQ8C8M1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.94■■□□□ 1.1
SinhcafQ8C8M1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SinhcafQ8C8M1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SinhcafQ8C8M1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SinhcafQ8C8M1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SinhcafQ8C8M1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SinhcafQ8C8M1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SinhcafQ8C8M1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SinhcafQ8C8M1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.92■■□□□ 1.1
SinhcafQ8C8M1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SinhcafQ8C8M1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.92■■□□□ 1.1
SinhcafQ8C8M1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SinhcafQ8C8M1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SinhcafQ8C8M1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.91■■□□□ 1.1
SinhcafQ8C8M1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SinhcafQ8C8M1 Gm27502-201ENSMUST00000183495 199 ntBASIC21.9■■□□□ 1.1
SinhcafQ8C8M1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SinhcafQ8C8M1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SinhcafQ8C8M1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SinhcafQ8C8M1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SinhcafQ8C8M1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SinhcafQ8C8M1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.89■■□□□ 1.09
SinhcafQ8C8M1 Gm12366-201ENSMUST00000121722 873 ntBASIC21.89■■□□□ 1.09
SinhcafQ8C8M1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.89■■□□□ 1.09
SinhcafQ8C8M1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.89■■□□□ 1.09
SinhcafQ8C8M1 Gm5786-201ENSMUST00000085368 882 ntBASIC21.89■■□□□ 1.09
SinhcafQ8C8M1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SinhcafQ8C8M1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SinhcafQ8C8M1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SinhcafQ8C8M1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SinhcafQ8C8M1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SinhcafQ8C8M1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.88■■□□□ 1.09
SinhcafQ8C8M1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.88■■□□□ 1.09
SinhcafQ8C8M1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SinhcafQ8C8M1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SinhcafQ8C8M1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SinhcafQ8C8M1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SinhcafQ8C8M1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SinhcafQ8C8M1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SinhcafQ8C8M1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms