Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Rtp1Q8C8C1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.92■■□□□ 1.9
Rtp1Q8C8C1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Rtp1Q8C8C1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.91■■□□□ 1.9
Rtp1Q8C8C1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Rtp1Q8C8C1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Rtp1Q8C8C1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rtp1Q8C8C1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.9
Rtp1Q8C8C1 Gm9812-201ENSMUST00000061934 968 ntBASIC26.89■■□□□ 1.9
Rtp1Q8C8C1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rtp1Q8C8C1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rtp1Q8C8C1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
Rtp1Q8C8C1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Rtp1Q8C8C1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.88■■□□□ 1.89
Rtp1Q8C8C1 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.88■■□□□ 1.89
Rtp1Q8C8C1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
Rtp1Q8C8C1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rtp1Q8C8C1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Rtp1Q8C8C1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Rtp1Q8C8C1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rtp1Q8C8C1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rtp1Q8C8C1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Rtp1Q8C8C1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
Rtp1Q8C8C1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rtp1Q8C8C1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.82■■□□□ 1.88
Rtp1Q8C8C1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rtp1Q8C8C1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Rtp1Q8C8C1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Rtp1Q8C8C1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.81■■□□□ 1.88
Rtp1Q8C8C1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Rtp1Q8C8C1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.81■■□□□ 1.88
Rtp1Q8C8C1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rtp1Q8C8C1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rtp1Q8C8C1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rtp1Q8C8C1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Rtp1Q8C8C1 Rps24-207ENSMUST00000224568 714 ntBASIC26.79■■□□□ 1.88
Rtp1Q8C8C1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Rtp1Q8C8C1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.78■■□□□ 1.88
Rtp1Q8C8C1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.78■■□□□ 1.88
Rtp1Q8C8C1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.78■■□□□ 1.88
Rtp1Q8C8C1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Rtp1Q8C8C1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Rtp1Q8C8C1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rtp1Q8C8C1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rtp1Q8C8C1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Rtp1Q8C8C1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rtp1Q8C8C1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.75■■□□□ 1.87
Rtp1Q8C8C1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rtp1Q8C8C1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Rtp1Q8C8C1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Rtp1Q8C8C1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Rtp1Q8C8C1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rtp1Q8C8C1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Rtp1Q8C8C1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rtp1Q8C8C1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.74■■□□□ 1.87
Rtp1Q8C8C1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rtp1Q8C8C1 Gm15820-201ENSMUST00000201566 728 ntBASIC26.73■■□□□ 1.87
Rtp1Q8C8C1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rtp1Q8C8C1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rtp1Q8C8C1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Rtp1Q8C8C1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rtp1Q8C8C1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Rtp1Q8C8C1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.71■■□□□ 1.87
Rtp1Q8C8C1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Rtp1Q8C8C1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rtp1Q8C8C1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Rtp1Q8C8C1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.7■■□□□ 1.86
Rtp1Q8C8C1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.7■■□□□ 1.86
Rtp1Q8C8C1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Rtp1Q8C8C1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rtp1Q8C8C1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Rtp1Q8C8C1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Rtp1Q8C8C1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.68■■□□□ 1.86
Rtp1Q8C8C1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
Rtp1Q8C8C1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rtp1Q8C8C1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Rtp1Q8C8C1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Rtp1Q8C8C1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.67■■□□□ 1.86
Rtp1Q8C8C1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.66■■□□□ 1.86
Rtp1Q8C8C1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rtp1Q8C8C1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rtp1Q8C8C1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rtp1Q8C8C1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rtp1Q8C8C1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Rtp1Q8C8C1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Rtp1Q8C8C1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Rtp1Q8C8C1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rtp1Q8C8C1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rtp1Q8C8C1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rtp1Q8C8C1 Terc-201ENSMUST00000082862 423 ntBASIC26.62■■□□□ 1.85
Rtp1Q8C8C1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.62■■□□□ 1.85
Rtp1Q8C8C1 Gm45102-201ENSMUST00000207427 857 ntBASIC26.61■■□□□ 1.85
Rtp1Q8C8C1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rtp1Q8C8C1 Gm13238-201ENSMUST00000117655 780 ntBASIC26.6■■□□□ 1.85
Rtp1Q8C8C1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rtp1Q8C8C1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rtp1Q8C8C1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Rtp1Q8C8C1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.59■■□□□ 1.85
Rtp1Q8C8C1 Gm14117-201ENSMUST00000122417 843 ntBASIC26.59■■□□□ 1.85
Rtp1Q8C8C1 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.59■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms