Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Scfd1Q8BRF7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Scfd1Q8BRF7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Scfd1Q8BRF7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.69■■□□□ 1.86
Scfd1Q8BRF7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Scfd1Q8BRF7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Scfd1Q8BRF7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Scfd1Q8BRF7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Scfd1Q8BRF7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
Scfd1Q8BRF7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Scfd1Q8BRF7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Scfd1Q8BRF7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Scfd1Q8BRF7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Scfd1Q8BRF7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Scfd1Q8BRF7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Scfd1Q8BRF7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Scfd1Q8BRF7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Scfd1Q8BRF7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Scfd1Q8BRF7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Scfd1Q8BRF7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Scfd1Q8BRF7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.65■■□□□ 1.86
Scfd1Q8BRF7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Scfd1Q8BRF7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Scfd1Q8BRF7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Scfd1Q8BRF7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Scfd1Q8BRF7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Scfd1Q8BRF7 Gm27502-201ENSMUST00000183495 199 ntBASIC26.64■■□□□ 1.86
Scfd1Q8BRF7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Scfd1Q8BRF7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Scfd1Q8BRF7 Terc-201ENSMUST00000082862 423 ntBASIC26.63■■□□□ 1.85
Scfd1Q8BRF7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Scfd1Q8BRF7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Scfd1Q8BRF7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Scfd1Q8BRF7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Scfd1Q8BRF7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.61■■□□□ 1.85
Scfd1Q8BRF7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.61■■□□□ 1.85
Scfd1Q8BRF7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
Scfd1Q8BRF7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Scfd1Q8BRF7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Scfd1Q8BRF7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Scfd1Q8BRF7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Scfd1Q8BRF7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Scfd1Q8BRF7 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.59■■□□□ 1.85
Scfd1Q8BRF7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Scfd1Q8BRF7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.59■■□□□ 1.85
Scfd1Q8BRF7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.59■■□□□ 1.85
Scfd1Q8BRF7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Scfd1Q8BRF7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.58■■□□□ 1.85
Scfd1Q8BRF7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scfd1Q8BRF7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scfd1Q8BRF7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scfd1Q8BRF7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Scfd1Q8BRF7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Scfd1Q8BRF7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Scfd1Q8BRF7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Scfd1Q8BRF7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.55■■□□□ 1.84
Scfd1Q8BRF7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.55■■□□□ 1.84
Scfd1Q8BRF7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Scfd1Q8BRF7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scfd1Q8BRF7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scfd1Q8BRF7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scfd1Q8BRF7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scfd1Q8BRF7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Scfd1Q8BRF7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
Scfd1Q8BRF7 Gm14523-201ENSMUST00000117260 558 ntBASIC26.53■■□□□ 1.84
Scfd1Q8BRF7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Scfd1Q8BRF7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Scfd1Q8BRF7 Gm7332-201ENSMUST00000118351 454 ntBASIC26.52■■□□□ 1.84
Scfd1Q8BRF7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Scfd1Q8BRF7 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.52■■□□□ 1.84
Scfd1Q8BRF7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.52■■□□□ 1.84
Scfd1Q8BRF7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.51■■□□□ 1.84
Scfd1Q8BRF7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Scfd1Q8BRF7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Scfd1Q8BRF7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Scfd1Q8BRF7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Scfd1Q8BRF7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Scfd1Q8BRF7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Scfd1Q8BRF7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Scfd1Q8BRF7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Scfd1Q8BRF7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Scfd1Q8BRF7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Scfd1Q8BRF7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Scfd1Q8BRF7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Scfd1Q8BRF7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.47■■□□□ 1.83
Scfd1Q8BRF7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Scfd1Q8BRF7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.45■■□□□ 1.82
Scfd1Q8BRF7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Scfd1Q8BRF7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Scfd1Q8BRF7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Scfd1Q8BRF7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Scfd1Q8BRF7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Scfd1Q8BRF7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.43■■□□□ 1.82
Scfd1Q8BRF7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Scfd1Q8BRF7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Scfd1Q8BRF7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.42■■□□□ 1.82
Scfd1Q8BRF7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Scfd1Q8BRF7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.41■■□□□ 1.82
Scfd1Q8BRF7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Scfd1Q8BRF7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms