Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.32■■□□□ 1.32
Suds3Q8BR65 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.31■■□□□ 1.32
Suds3Q8BR65 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.31■■□□□ 1.32
Suds3Q8BR65 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Suds3Q8BR65 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Suds3Q8BR65 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Suds3Q8BR65 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
Suds3Q8BR65 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Suds3Q8BR65 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Suds3Q8BR65 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Suds3Q8BR65 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Suds3Q8BR65 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Suds3Q8BR65 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Suds3Q8BR65 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.27■■□□□ 1.32
Suds3Q8BR65 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Suds3Q8BR65 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Suds3Q8BR65 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Suds3Q8BR65 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Suds3Q8BR65 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Suds3Q8BR65 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Suds3Q8BR65 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Suds3Q8BR65 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Suds3Q8BR65 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Suds3Q8BR65 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Suds3Q8BR65 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Suds3Q8BR65 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Suds3Q8BR65 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Suds3Q8BR65 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
Suds3Q8BR65 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Suds3Q8BR65 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.22■■□□□ 1.31
Suds3Q8BR65 Particl-201ENSMUST00000205370 1560 ntBASIC23.22■■□□□ 1.31
Suds3Q8BR65 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Suds3Q8BR65 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Suds3Q8BR65 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.21■■□□□ 1.31
Suds3Q8BR65 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
Suds3Q8BR65 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Suds3Q8BR65 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.19■■□□□ 1.3
Suds3Q8BR65 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Suds3Q8BR65 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Suds3Q8BR65 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Suds3Q8BR65 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Suds3Q8BR65 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Suds3Q8BR65 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
Suds3Q8BR65 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Suds3Q8BR65 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Suds3Q8BR65 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Suds3Q8BR65 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Suds3Q8BR65 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Suds3Q8BR65 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Suds3Q8BR65 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.16■■□□□ 1.3
Suds3Q8BR65 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Suds3Q8BR65 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Suds3Q8BR65 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Suds3Q8BR65 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Suds3Q8BR65 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Suds3Q8BR65 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Suds3Q8BR65 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Suds3Q8BR65 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Suds3Q8BR65 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Suds3Q8BR65 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Suds3Q8BR65 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Suds3Q8BR65 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Suds3Q8BR65 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Suds3Q8BR65 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.13■■□□□ 1.29
Suds3Q8BR65 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Suds3Q8BR65 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Suds3Q8BR65 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Suds3Q8BR65 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Suds3Q8BR65 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Suds3Q8BR65 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Suds3Q8BR65 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Suds3Q8BR65 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Suds3Q8BR65 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.1■■□□□ 1.29
Suds3Q8BR65 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Suds3Q8BR65 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.1■■□□□ 1.29
Suds3Q8BR65 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Suds3Q8BR65 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Suds3Q8BR65 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Suds3Q8BR65 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Suds3Q8BR65 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Suds3Q8BR65 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Suds3Q8BR65 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Suds3Q8BR65 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Suds3Q8BR65 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Suds3Q8BR65 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.08■■□□□ 1.29
Suds3Q8BR65 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Suds3Q8BR65 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Suds3Q8BR65 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Suds3Q8BR65 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Suds3Q8BR65 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Suds3Q8BR65 Gm37136-201ENSMUST00000194368 194 ntBASIC23.07■■□□□ 1.28
Suds3Q8BR65 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Suds3Q8BR65 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
Suds3Q8BR65 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Suds3Q8BR65 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Suds3Q8BR65 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Suds3Q8BR65 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Suds3Q8BR65 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Suds3Q8BR65 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Suds3Q8BR65 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms