Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.82■□□□□ 0.6
Atpaf1Q811I0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atpaf1Q811I0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atpaf1Q811I0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atpaf1Q811I0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Atpaf1Q811I0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atpaf1Q811I0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Atpaf1Q811I0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.81■□□□□ 0.6
Atpaf1Q811I0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atpaf1Q811I0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atpaf1Q811I0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atpaf1Q811I0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atpaf1Q811I0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atpaf1Q811I0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.81■□□□□ 0.6
Atpaf1Q811I0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Atpaf1Q811I0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atpaf1Q811I0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atpaf1Q811I0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atpaf1Q811I0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Atpaf1Q811I0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atpaf1Q811I0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.8■□□□□ 0.6
Atpaf1Q811I0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atpaf1Q811I0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atpaf1Q811I0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atpaf1Q811I0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.79■□□□□ 0.6
Atpaf1Q811I0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atpaf1Q811I0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atpaf1Q811I0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atpaf1Q811I0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atpaf1Q811I0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atpaf1Q811I0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atpaf1Q811I0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atpaf1Q811I0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atpaf1Q811I0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atpaf1Q811I0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atpaf1Q811I0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atpaf1Q811I0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atpaf1Q811I0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atpaf1Q811I0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atpaf1Q811I0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atpaf1Q811I0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.77■□□□□ 0.6
Atpaf1Q811I0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atpaf1Q811I0 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.77■□□□□ 0.59
Atpaf1Q811I0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Atpaf1Q811I0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.76■□□□□ 0.59
Atpaf1Q811I0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atpaf1Q811I0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atpaf1Q811I0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atpaf1Q811I0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atpaf1Q811I0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atpaf1Q811I0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atpaf1Q811I0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atpaf1Q811I0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atpaf1Q811I0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atpaf1Q811I0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atpaf1Q811I0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Atpaf1Q811I0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atpaf1Q811I0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Atpaf1Q811I0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atpaf1Q811I0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Atpaf1Q811I0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atpaf1Q811I0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atpaf1Q811I0 Peli2-204ENSMUST00000226513 1320 ntBASIC18.72■□□□□ 0.59
Atpaf1Q811I0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atpaf1Q811I0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atpaf1Q811I0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atpaf1Q811I0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atpaf1Q811I0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atpaf1Q811I0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atpaf1Q811I0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.7■□□□□ 0.58
Atpaf1Q811I0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atpaf1Q811I0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atpaf1Q811I0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atpaf1Q811I0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Atpaf1Q811I0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atpaf1Q811I0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atpaf1Q811I0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atpaf1Q811I0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atpaf1Q811I0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atpaf1Q811I0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.67■□□□□ 0.58
Atpaf1Q811I0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atpaf1Q811I0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Atpaf1Q811I0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atpaf1Q811I0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atpaf1Q811I0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Atpaf1Q811I0 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.66■□□□□ 0.58
Atpaf1Q811I0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atpaf1Q811I0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Atpaf1Q811I0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atpaf1Q811I0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atpaf1Q811I0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atpaf1Q811I0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atpaf1Q811I0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Atpaf1Q811I0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
Atpaf1Q811I0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Atpaf1Q811I0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atpaf1Q811I0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atpaf1Q811I0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atpaf1Q811I0 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.64■□□□□ 0.57
Atpaf1Q811I0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms