Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shc4Q6S5L9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shc4Q6S5L9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shc4Q6S5L9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Shc4Q6S5L9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Shc4Q6S5L9 Gm45364-201ENSMUST00000210883 159 ntBASIC21.43■■□□□ 1.02
Shc4Q6S5L9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shc4Q6S5L9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Shc4Q6S5L9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Shc4Q6S5L9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.42■■□□□ 1.02
Shc4Q6S5L9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.41■■□□□ 1.02
Shc4Q6S5L9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shc4Q6S5L9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Shc4Q6S5L9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shc4Q6S5L9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.39■■□□□ 1.02
Shc4Q6S5L9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Shc4Q6S5L9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shc4Q6S5L9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shc4Q6S5L9 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.38■■□□□ 1.01
Shc4Q6S5L9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Shc4Q6S5L9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.37■■□□□ 1.01
Shc4Q6S5L9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shc4Q6S5L9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shc4Q6S5L9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Shc4Q6S5L9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.37■■□□□ 1.01
Shc4Q6S5L9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shc4Q6S5L9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Shc4Q6S5L9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Shc4Q6S5L9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shc4Q6S5L9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shc4Q6S5L9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
Shc4Q6S5L9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shc4Q6S5L9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Shc4Q6S5L9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shc4Q6S5L9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.35■■□□□ 1.01
Shc4Q6S5L9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shc4Q6S5L9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Shc4Q6S5L9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Shc4Q6S5L9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.33■■□□□ 1.01
Shc4Q6S5L9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Shc4Q6S5L9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.32■■□□□ 1
Shc4Q6S5L9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shc4Q6S5L9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shc4Q6S5L9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Shc4Q6S5L9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.32■■□□□ 1
Shc4Q6S5L9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shc4Q6S5L9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shc4Q6S5L9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.31■■□□□ 1
Shc4Q6S5L9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Shc4Q6S5L9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.31■■□□□ 1
Shc4Q6S5L9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.31■■□□□ 1
Shc4Q6S5L9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shc4Q6S5L9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.3■■□□□ 1
Shc4Q6S5L9 Gm12366-201ENSMUST00000121722 873 ntBASIC21.3■■□□□ 1
Shc4Q6S5L9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.3■■□□□ 1
Shc4Q6S5L9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shc4Q6S5L9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.3■■□□□ 1
Shc4Q6S5L9 Gm5786-201ENSMUST00000085368 882 ntBASIC21.3■■□□□ 1
Shc4Q6S5L9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shc4Q6S5L9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.3■■□□□ 1
Shc4Q6S5L9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shc4Q6S5L9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.29■■□□□ 1
Shc4Q6S5L9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.28■■□□□ 1
Shc4Q6S5L9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shc4Q6S5L9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.27■■□□□ 1
Shc4Q6S5L9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.27■■□□□ 1
Shc4Q6S5L9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shc4Q6S5L9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shc4Q6S5L9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shc4Q6S5L9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shc4Q6S5L9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shc4Q6S5L9 Gm9812-201ENSMUST00000061934 968 ntBASIC21.26■□□□□ 0.99
Shc4Q6S5L9 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.26■□□□□ 0.99
Shc4Q6S5L9 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.26■□□□□ 0.99
Shc4Q6S5L9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shc4Q6S5L9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shc4Q6S5L9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shc4Q6S5L9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shc4Q6S5L9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shc4Q6S5L9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.24■□□□□ 0.99
Shc4Q6S5L9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shc4Q6S5L9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shc4Q6S5L9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shc4Q6S5L9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shc4Q6S5L9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shc4Q6S5L9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shc4Q6S5L9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Shc4Q6S5L9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shc4Q6S5L9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Shc4Q6S5L9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shc4Q6S5L9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Shc4Q6S5L9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shc4Q6S5L9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shc4Q6S5L9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Shc4Q6S5L9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shc4Q6S5L9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shc4Q6S5L9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shc4Q6S5L9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shc4Q6S5L9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.21■□□□□ 0.99
Shc4Q6S5L9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms