Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC27.24■■□□□ 1.95
Scn10aQ6QIY3 AC153911.1-201ENSMUST00000220378 758 ntBASIC27.24■■□□□ 1.95
Scn10aQ6QIY3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Scn10aQ6QIY3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Scn10aQ6QIY3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
Scn10aQ6QIY3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Scn10aQ6QIY3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Scn10aQ6QIY3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
Scn10aQ6QIY3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Scn10aQ6QIY3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Scn10aQ6QIY3 Terc-201ENSMUST00000082862 423 ntBASIC27.19■■□□□ 1.94
Scn10aQ6QIY3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Scn10aQ6QIY3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.19■■□□□ 1.94
Scn10aQ6QIY3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Scn10aQ6QIY3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Scn10aQ6QIY3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
Scn10aQ6QIY3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Scn10aQ6QIY3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Scn10aQ6QIY3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
Scn10aQ6QIY3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC27.14■■□□□ 1.94
Scn10aQ6QIY3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC27.13■■□□□ 1.93
Scn10aQ6QIY3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.13■■□□□ 1.93
Scn10aQ6QIY3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Scn10aQ6QIY3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Scn10aQ6QIY3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Scn10aQ6QIY3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Scn10aQ6QIY3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Scn10aQ6QIY3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Scn10aQ6QIY3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Scn10aQ6QIY3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC27.08■■□□□ 1.93
Scn10aQ6QIY3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Scn10aQ6QIY3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
Scn10aQ6QIY3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.92
Scn10aQ6QIY3 Gm5522-201ENSMUST00000189483 1242 ntBASIC27.07■■□□□ 1.92
Scn10aQ6QIY3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Scn10aQ6QIY3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Scn10aQ6QIY3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Scn10aQ6QIY3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Scn10aQ6QIY3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Scn10aQ6QIY3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Scn10aQ6QIY3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC27.05■■□□□ 1.92
Scn10aQ6QIY3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Scn10aQ6QIY3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Scn10aQ6QIY3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Scn10aQ6QIY3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Scn10aQ6QIY3 Gm15039-201ENSMUST00000118914 875 ntBASIC27.04■■□□□ 1.92
Scn10aQ6QIY3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Scn10aQ6QIY3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Scn10aQ6QIY3 Gm15546-201ENSMUST00000122095 826 ntBASIC27.03■■□□□ 1.92
Scn10aQ6QIY3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Scn10aQ6QIY3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Scn10aQ6QIY3 Zxda-201ENSMUST00000117281 2621 ntBASIC27.02■■□□□ 1.92
Scn10aQ6QIY3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Scn10aQ6QIY3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Scn10aQ6QIY3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Scn10aQ6QIY3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.01■■□□□ 1.91
Scn10aQ6QIY3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Scn10aQ6QIY3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Scn10aQ6QIY3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Scn10aQ6QIY3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.99■■□□□ 1.91
Scn10aQ6QIY3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.98■■□□□ 1.91
Scn10aQ6QIY3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Scn10aQ6QIY3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
Scn10aQ6QIY3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Scn10aQ6QIY3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Scn10aQ6QIY3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Scn10aQ6QIY3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Scn10aQ6QIY3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
Scn10aQ6QIY3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
Scn10aQ6QIY3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Scn10aQ6QIY3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Scn10aQ6QIY3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Scn10aQ6QIY3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Scn10aQ6QIY3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.96■■□□□ 1.91
Scn10aQ6QIY3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.96■■□□□ 1.91
Scn10aQ6QIY3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Scn10aQ6QIY3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Scn10aQ6QIY3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Scn10aQ6QIY3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.95■■□□□ 1.9
Scn10aQ6QIY3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.95■■□□□ 1.9
Scn10aQ6QIY3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Scn10aQ6QIY3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Scn10aQ6QIY3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.94■■□□□ 1.9
Scn10aQ6QIY3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Scn10aQ6QIY3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Scn10aQ6QIY3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
Scn10aQ6QIY3 Gm43566-201ENSMUST00000196851 808 ntBASIC26.93■■□□□ 1.9
Scn10aQ6QIY3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.93■■□□□ 1.9
Scn10aQ6QIY3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Scn10aQ6QIY3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.93■■□□□ 1.9
Scn10aQ6QIY3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Scn10aQ6QIY3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.92■■□□□ 1.9
Scn10aQ6QIY3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Scn10aQ6QIY3 Gm44428-201ENSMUST00000204474 874 ntBASIC26.9■■□□□ 1.9
Scn10aQ6QIY3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.9■■□□□ 1.9
Scn10aQ6QIY3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Scn10aQ6QIY3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.89■■□□□ 1.9
Scn10aQ6QIY3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
Scn10aQ6QIY3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Scn10aQ6QIY3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms