Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tgfbr1Q64729 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tgfbr1Q64729 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr1Q64729 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr1Q64729 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr1Q64729 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.63■□□□□ 0.57
Tgfbr1Q64729 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr1Q64729 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr1Q64729 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr1Q64729 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tgfbr1Q64729 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tgfbr1Q64729 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tgfbr1Q64729 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tgfbr1Q64729 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.62■□□□□ 0.57
Tgfbr1Q64729 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tgfbr1Q64729 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tgfbr1Q64729 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tgfbr1Q64729 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tgfbr1Q64729 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr1Q64729 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr1Q64729 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr1Q64729 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tgfbr1Q64729 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tgfbr1Q64729 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.58■□□□□ 0.56
Tgfbr1Q64729 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.58■□□□□ 0.56
Tgfbr1Q64729 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tgfbr1Q64729 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr1Q64729 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr1Q64729 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tgfbr1Q64729 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr1Q64729 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr1Q64729 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr1Q64729 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tgfbr1Q64729 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Tgfbr1Q64729 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.56■□□□□ 0.56
Tgfbr1Q64729 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Tgfbr1Q64729 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tgfbr1Q64729 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tgfbr1Q64729 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tgfbr1Q64729 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Tgfbr1Q64729 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tgfbr1Q64729 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tgfbr1Q64729 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Tgfbr1Q64729 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tgfbr1Q64729 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tgfbr1Q64729 Particl-201ENSMUST00000205370 1560 ntBASIC18.53■□□□□ 0.56
Tgfbr1Q64729 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tgfbr1Q64729 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Tgfbr1Q64729 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tgfbr1Q64729 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.52■□□□□ 0.56
Tgfbr1Q64729 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tgfbr1Q64729 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tgfbr1Q64729 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tgfbr1Q64729 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.51■□□□□ 0.55
Tgfbr1Q64729 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tgfbr1Q64729 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tgfbr1Q64729 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr1Q64729 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr1Q64729 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr1Q64729 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr1Q64729 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tgfbr1Q64729 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr1Q64729 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tgfbr1Q64729 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tgfbr1Q64729 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tgfbr1Q64729 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tgfbr1Q64729 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tgfbr1Q64729 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tgfbr1Q64729 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.48■□□□□ 0.55
Tgfbr1Q64729 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tgfbr1Q64729 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tgfbr1Q64729 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tgfbr1Q64729 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tgfbr1Q64729 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tgfbr1Q64729 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tgfbr1Q64729 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tgfbr1Q64729 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.47■□□□□ 0.55
Tgfbr1Q64729 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tgfbr1Q64729 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tgfbr1Q64729 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tgfbr1Q64729 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tgfbr1Q64729 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tgfbr1Q64729 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr1Q64729 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr1Q64729 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr1Q64729 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tgfbr1Q64729 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.45■□□□□ 0.54
Tgfbr1Q64729 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tgfbr1Q64729 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Tgfbr1Q64729 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tgfbr1Q64729 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tgfbr1Q64729 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tgfbr1Q64729 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tgfbr1Q64729 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tgfbr1Q64729 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Tgfbr1Q64729 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.43■□□□□ 0.54
Tgfbr1Q64729 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr1Q64729 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Tgfbr1Q64729 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Tgfbr1Q64729 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms