Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom1Q5SX79 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom1Q5SX79 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom1Q5SX79 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Shroom1Q5SX79 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Shroom1Q5SX79 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.52■■□□□ 1.52
Shroom1Q5SX79 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Shroom1Q5SX79 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.51■■□□□ 1.51
Shroom1Q5SX79 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Shroom1Q5SX79 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Shroom1Q5SX79 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Shroom1Q5SX79 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Shroom1Q5SX79 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
Shroom1Q5SX79 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom1Q5SX79 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Shroom1Q5SX79 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Shroom1Q5SX79 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Shroom1Q5SX79 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.48■■□□□ 1.51
Shroom1Q5SX79 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shroom1Q5SX79 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.48■■□□□ 1.51
Shroom1Q5SX79 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Shroom1Q5SX79 Gm9812-201ENSMUST00000061934 968 ntBASIC24.48■■□□□ 1.51
Shroom1Q5SX79 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shroom1Q5SX79 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shroom1Q5SX79 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Shroom1Q5SX79 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Shroom1Q5SX79 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Shroom1Q5SX79 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shroom1Q5SX79 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Shroom1Q5SX79 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Shroom1Q5SX79 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.46■■□□□ 1.51
Shroom1Q5SX79 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shroom1Q5SX79 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Shroom1Q5SX79 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.46■■□□□ 1.51
Shroom1Q5SX79 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.46■■□□□ 1.51
Shroom1Q5SX79 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Shroom1Q5SX79 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.46■■□□□ 1.51
Shroom1Q5SX79 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Shroom1Q5SX79 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.51
Shroom1Q5SX79 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shroom1Q5SX79 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Shroom1Q5SX79 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.44■■□□□ 1.5
Shroom1Q5SX79 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.44■■□□□ 1.5
Shroom1Q5SX79 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Shroom1Q5SX79 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Shroom1Q5SX79 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Shroom1Q5SX79 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Shroom1Q5SX79 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Shroom1Q5SX79 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.42■■□□□ 1.5
Shroom1Q5SX79 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Shroom1Q5SX79 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Shroom1Q5SX79 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Shroom1Q5SX79 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Shroom1Q5SX79 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Shroom1Q5SX79 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Shroom1Q5SX79 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Shroom1Q5SX79 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.4■■□□□ 1.5
Shroom1Q5SX79 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Shroom1Q5SX79 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
Shroom1Q5SX79 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shroom1Q5SX79 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Shroom1Q5SX79 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shroom1Q5SX79 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shroom1Q5SX79 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shroom1Q5SX79 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.4■■□□□ 1.5
Shroom1Q5SX79 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Shroom1Q5SX79 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Shroom1Q5SX79 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shroom1Q5SX79 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shroom1Q5SX79 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Shroom1Q5SX79 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Shroom1Q5SX79 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Shroom1Q5SX79 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shroom1Q5SX79 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.37■■□□□ 1.49
Shroom1Q5SX79 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shroom1Q5SX79 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shroom1Q5SX79 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.35■■□□□ 1.49
Shroom1Q5SX79 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.35■■□□□ 1.49
Shroom1Q5SX79 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Shroom1Q5SX79 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Shroom1Q5SX79 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom1Q5SX79 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom1Q5SX79 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom1Q5SX79 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shroom1Q5SX79 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Shroom1Q5SX79 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.33■■□□□ 1.49
Shroom1Q5SX79 Gm7332-201ENSMUST00000118351 454 ntBASIC24.33■■□□□ 1.49
Shroom1Q5SX79 Gm27502-201ENSMUST00000183495 199 ntBASIC24.33■■□□□ 1.49
Shroom1Q5SX79 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Shroom1Q5SX79 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shroom1Q5SX79 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shroom1Q5SX79 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Shroom1Q5SX79 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shroom1Q5SX79 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shroom1Q5SX79 Gm14523-201ENSMUST00000117260 558 ntBASIC24.31■■□□□ 1.48
Shroom1Q5SX79 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shroom1Q5SX79 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Shroom1Q5SX79 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Shroom1Q5SX79 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shroom1Q5SX79 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms