Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Usp30Q3UN04 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Usp30Q3UN04 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
Usp30Q3UN04 Gm27502-201ENSMUST00000183495 199 ntBASIC23.33■■□□□ 1.33
Usp30Q3UN04 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.33■■□□□ 1.33
Usp30Q3UN04 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Usp30Q3UN04 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Usp30Q3UN04 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.32■■□□□ 1.32
Usp30Q3UN04 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Usp30Q3UN04 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp30Q3UN04 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.31■■□□□ 1.32
Usp30Q3UN04 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Usp30Q3UN04 Gm7332-201ENSMUST00000118351 454 ntBASIC23.31■■□□□ 1.32
Usp30Q3UN04 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Usp30Q3UN04 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Usp30Q3UN04 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Usp30Q3UN04 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.31■■□□□ 1.32
Usp30Q3UN04 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Usp30Q3UN04 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.3■■□□□ 1.32
Usp30Q3UN04 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Usp30Q3UN04 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp30Q3UN04 Gm14523-201ENSMUST00000117260 558 ntBASIC23.28■■□□□ 1.32
Usp30Q3UN04 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp30Q3UN04 Terc-201ENSMUST00000082862 423 ntBASIC23.28■■□□□ 1.32
Usp30Q3UN04 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Usp30Q3UN04 Amer2-203ENSMUST00000225247 2662 ntBASIC23.28■■□□□ 1.32
Usp30Q3UN04 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Usp30Q3UN04 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Usp30Q3UN04 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Usp30Q3UN04 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.26■■□□□ 1.31
Usp30Q3UN04 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp30Q3UN04 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp30Q3UN04 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp30Q3UN04 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Usp30Q3UN04 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.25■■□□□ 1.31
Usp30Q3UN04 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Usp30Q3UN04 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.25■■□□□ 1.31
Usp30Q3UN04 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.24■■□□□ 1.31
Usp30Q3UN04 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Usp30Q3UN04 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Usp30Q3UN04 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Usp30Q3UN04 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.23■■□□□ 1.31
Usp30Q3UN04 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.23■■□□□ 1.31
Usp30Q3UN04 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Usp30Q3UN04 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Usp30Q3UN04 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Usp30Q3UN04 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Usp30Q3UN04 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Usp30Q3UN04 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp30Q3UN04 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Usp30Q3UN04 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Usp30Q3UN04 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Usp30Q3UN04 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.21■■□□□ 1.31
Usp30Q3UN04 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Usp30Q3UN04 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Usp30Q3UN04 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Usp30Q3UN04 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.19■■□□□ 1.3
Usp30Q3UN04 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Usp30Q3UN04 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Usp30Q3UN04 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Usp30Q3UN04 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp30Q3UN04 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.17■■□□□ 1.3
Usp30Q3UN04 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Usp30Q3UN04 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp30Q3UN04 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp30Q3UN04 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
Usp30Q3UN04 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Usp30Q3UN04 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Usp30Q3UN04 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Usp30Q3UN04 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Usp30Q3UN04 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.15■■□□□ 1.3
Usp30Q3UN04 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Usp30Q3UN04 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.14■■□□□ 1.29
Usp30Q3UN04 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Usp30Q3UN04 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Usp30Q3UN04 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Usp30Q3UN04 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.13■■□□□ 1.29
Usp30Q3UN04 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Usp30Q3UN04 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp30Q3UN04 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp30Q3UN04 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp30Q3UN04 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp30Q3UN04 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Usp30Q3UN04 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Usp30Q3UN04 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Usp30Q3UN04 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.11■■□□□ 1.29
Usp30Q3UN04 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Usp30Q3UN04 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp30Q3UN04 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp30Q3UN04 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.09■■□□□ 1.29
Usp30Q3UN04 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp30Q3UN04 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Usp30Q3UN04 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp30Q3UN04 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Usp30Q3UN04 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.09■■□□□ 1.29
Usp30Q3UN04 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.08■■□□□ 1.29
Usp30Q3UN04 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Usp30Q3UN04 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Usp30Q3UN04 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Usp30Q3UN04 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms