Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Naf1Q3UMQ8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Naf1Q3UMQ8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Naf1Q3UMQ8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Naf1Q3UMQ8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Naf1Q3UMQ8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Naf1Q3UMQ8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Naf1Q3UMQ8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Naf1Q3UMQ8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Naf1Q3UMQ8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Naf1Q3UMQ8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Naf1Q3UMQ8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Naf1Q3UMQ8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Naf1Q3UMQ8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Naf1Q3UMQ8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Naf1Q3UMQ8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Naf1Q3UMQ8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Naf1Q3UMQ8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
Naf1Q3UMQ8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Naf1Q3UMQ8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.33
Naf1Q3UMQ8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Naf1Q3UMQ8 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.39■■□□□ 1.33
Naf1Q3UMQ8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.38■■□□□ 1.33
Naf1Q3UMQ8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Naf1Q3UMQ8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Naf1Q3UMQ8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Naf1Q3UMQ8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.37■■□□□ 1.33
Naf1Q3UMQ8 Gm12366-201ENSMUST00000121722 873 ntBASIC23.37■■□□□ 1.33
Naf1Q3UMQ8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.37■■□□□ 1.33
Naf1Q3UMQ8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.37■■□□□ 1.33
Naf1Q3UMQ8 Gm27502-201ENSMUST00000183495 199 ntBASIC23.37■■□□□ 1.33
Naf1Q3UMQ8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.37■■□□□ 1.33
Naf1Q3UMQ8 Gm5786-201ENSMUST00000085368 882 ntBASIC23.37■■□□□ 1.33
Naf1Q3UMQ8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Naf1Q3UMQ8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Naf1Q3UMQ8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Naf1Q3UMQ8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Naf1Q3UMQ8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Naf1Q3UMQ8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Naf1Q3UMQ8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.35■■□□□ 1.33
Naf1Q3UMQ8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Naf1Q3UMQ8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Naf1Q3UMQ8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Naf1Q3UMQ8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.34■■□□□ 1.33
Naf1Q3UMQ8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Naf1Q3UMQ8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Naf1Q3UMQ8 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.34■■□□□ 1.33
Naf1Q3UMQ8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Naf1Q3UMQ8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Naf1Q3UMQ8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Naf1Q3UMQ8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Naf1Q3UMQ8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Naf1Q3UMQ8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Naf1Q3UMQ8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Naf1Q3UMQ8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Naf1Q3UMQ8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Naf1Q3UMQ8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Naf1Q3UMQ8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Naf1Q3UMQ8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Naf1Q3UMQ8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Naf1Q3UMQ8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Naf1Q3UMQ8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.31■■□□□ 1.32
Naf1Q3UMQ8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Naf1Q3UMQ8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Naf1Q3UMQ8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Naf1Q3UMQ8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.29■■□□□ 1.32
Naf1Q3UMQ8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Naf1Q3UMQ8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Naf1Q3UMQ8 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.29■■□□□ 1.32
Naf1Q3UMQ8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Naf1Q3UMQ8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Naf1Q3UMQ8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Naf1Q3UMQ8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Naf1Q3UMQ8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Naf1Q3UMQ8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Naf1Q3UMQ8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Naf1Q3UMQ8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Naf1Q3UMQ8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Naf1Q3UMQ8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.27■■□□□ 1.32
Naf1Q3UMQ8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.26■■□□□ 1.31
Naf1Q3UMQ8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Naf1Q3UMQ8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Naf1Q3UMQ8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.26■■□□□ 1.31
Naf1Q3UMQ8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.26■■□□□ 1.31
Naf1Q3UMQ8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Naf1Q3UMQ8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Naf1Q3UMQ8 Terc-201ENSMUST00000082862 423 ntBASIC23.26■■□□□ 1.31
Naf1Q3UMQ8 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.25■■□□□ 1.31
Naf1Q3UMQ8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.25■■□□□ 1.31
Naf1Q3UMQ8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Naf1Q3UMQ8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Naf1Q3UMQ8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Naf1Q3UMQ8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Naf1Q3UMQ8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Naf1Q3UMQ8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Naf1Q3UMQ8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Naf1Q3UMQ8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Naf1Q3UMQ8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Naf1Q3UMQ8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.22■■□□□ 1.31
Naf1Q3UMQ8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms