Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.33■■□□□ 1.33
Cdh6P97326 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Cdh6P97326 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.33■■□□□ 1.32
Cdh6P97326 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cdh6P97326 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cdh6P97326 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Cdh6P97326 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cdh6P97326 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Cdh6P97326 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cdh6P97326 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Cdh6P97326 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.31■■□□□ 1.32
Cdh6P97326 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cdh6P97326 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cdh6P97326 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.3■■□□□ 1.32
Cdh6P97326 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdh6P97326 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdh6P97326 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdh6P97326 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdh6P97326 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdh6P97326 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cdh6P97326 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Cdh6P97326 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cdh6P97326 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cdh6P97326 Mir3960-201ENSMUST00000198213 73 ntBASIC23.27■■□□□ 1.32
Cdh6P97326 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.27■■□□□ 1.32
Cdh6P97326 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.27■■□□□ 1.32
Cdh6P97326 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cdh6P97326 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cdh6P97326 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Cdh6P97326 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cdh6P97326 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cdh6P97326 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cdh6P97326 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cdh6P97326 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cdh6P97326 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cdh6P97326 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cdh6P97326 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cdh6P97326 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cdh6P97326 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cdh6P97326 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.24■■□□□ 1.31
Cdh6P97326 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cdh6P97326 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdh6P97326 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Cdh6P97326 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Cdh6P97326 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdh6P97326 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.21■■□□□ 1.31
Cdh6P97326 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.21■■□□□ 1.31
Cdh6P97326 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cdh6P97326 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdh6P97326 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdh6P97326 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdh6P97326 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.2■■□□□ 1.3
Cdh6P97326 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cdh6P97326 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdh6P97326 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdh6P97326 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cdh6P97326 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdh6P97326 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdh6P97326 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdh6P97326 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.18■■□□□ 1.3
Cdh6P97326 Gm9812-201ENSMUST00000061934 968 ntBASIC23.18■■□□□ 1.3
Cdh6P97326 Gm45364-201ENSMUST00000210883 159 ntBASIC23.17■■□□□ 1.3
Cdh6P97326 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdh6P97326 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdh6P97326 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Cdh6P97326 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdh6P97326 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdh6P97326 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdh6P97326 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdh6P97326 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdh6P97326 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdh6P97326 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cdh6P97326 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cdh6P97326 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.15■■□□□ 1.3
Cdh6P97326 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cdh6P97326 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Cdh6P97326 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.14■■□□□ 1.29
Cdh6P97326 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cdh6P97326 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Cdh6P97326 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.13■■□□□ 1.29
Cdh6P97326 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.13■■□□□ 1.29
Cdh6P97326 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdh6P97326 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.13■■□□□ 1.29
Cdh6P97326 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.13■■□□□ 1.29
Cdh6P97326 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdh6P97326 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cdh6P97326 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdh6P97326 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdh6P97326 Gm6311-201ENSMUST00000073790 878 ntBASIC23.12■■□□□ 1.29
Cdh6P97326 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdh6P97326 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.12■■□□□ 1.29
Cdh6P97326 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Cdh6P97326 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.11■■□□□ 1.29
Cdh6P97326 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.11■■□□□ 1.29
Cdh6P97326 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cdh6P97326 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Cdh6P97326 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cdh6P97326 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.1■■□□□ 1.29
Cdh6P97326 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.1■■□□□ 1.29
Cdh6P97326 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms