Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
H3f3aP84244 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.47■□□□□ 0.87
H3f3aP84244 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H3f3aP84244 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H3f3aP84244 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.45■□□□□ 0.86
H3f3aP84244 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
H3f3aP84244 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.45■□□□□ 0.86
H3f3aP84244 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
H3f3aP84244 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.45■□□□□ 0.86
H3f3aP84244 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H3f3aP84244 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H3f3aP84244 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
H3f3aP84244 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
H3f3aP84244 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3f3aP84244 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.43■□□□□ 0.86
H3f3aP84244 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3f3aP84244 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H3f3aP84244 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3f3aP84244 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
H3f3aP84244 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H3f3aP84244 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
H3f3aP84244 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.42■□□□□ 0.86
H3f3aP84244 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
H3f3aP84244 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.42■□□□□ 0.86
H3f3aP84244 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3f3aP84244 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3f3aP84244 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.41■□□□□ 0.86
H3f3aP84244 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.41■□□□□ 0.86
H3f3aP84244 Mir3960-201ENSMUST00000198213 73 ntBASIC20.41■□□□□ 0.86
H3f3aP84244 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3f3aP84244 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
H3f3aP84244 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
H3f3aP84244 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.39■□□□□ 0.85
H3f3aP84244 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.39■□□□□ 0.85
H3f3aP84244 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
H3f3aP84244 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
H3f3aP84244 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.37■□□□□ 0.85
H3f3aP84244 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
H3f3aP84244 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.37■□□□□ 0.85
H3f3aP84244 Gm9812-201ENSMUST00000061934 968 ntBASIC20.37■□□□□ 0.85
H3f3aP84244 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3f3aP84244 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3f3aP84244 Gm45364-201ENSMUST00000210883 159 ntBASIC20.36■□□□□ 0.85
H3f3aP84244 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H3f3aP84244 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H3f3aP84244 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
H3f3aP84244 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H3f3aP84244 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H3f3aP84244 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H3f3aP84244 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
H3f3aP84244 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.35■□□□□ 0.85
H3f3aP84244 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
H3f3aP84244 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3f3aP84244 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3f3aP84244 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3f3aP84244 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3f3aP84244 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H3f3aP84244 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H3f3aP84244 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H3f3aP84244 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H3f3aP84244 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H3f3aP84244 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3f3aP84244 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
H3f3aP84244 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3f3aP84244 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H3f3aP84244 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.32■□□□□ 0.84
H3f3aP84244 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
H3f3aP84244 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H3f3aP84244 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
H3f3aP84244 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H3f3aP84244 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
H3f3aP84244 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H3f3aP84244 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.31■□□□□ 0.84
H3f3aP84244 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.3■□□□□ 0.84
H3f3aP84244 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3f3aP84244 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.3■□□□□ 0.84
H3f3aP84244 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.3■□□□□ 0.84
H3f3aP84244 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3f3aP84244 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
H3f3aP84244 Gm6311-201ENSMUST00000073790 878 ntBASIC20.29■□□□□ 0.84
H3f3aP84244 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3f3aP84244 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
H3f3aP84244 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3f3aP84244 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H3f3aP84244 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3f3aP84244 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3f3aP84244 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H3f3aP84244 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
H3f3aP84244 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
H3f3aP84244 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.27■□□□□ 0.84
H3f3aP84244 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.27■□□□□ 0.84
H3f3aP84244 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H3f3aP84244 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.26■□□□□ 0.83
H3f3aP84244 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H3f3aP84244 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
H3f3aP84244 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H3f3aP84244 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H3f3aP84244 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3f3aP84244 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3f3aP84244 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 125.1 ms