Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Crnkl1P63154 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.55■■□□□ 1.2
Crnkl1P63154 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.55■■□□□ 1.2
Crnkl1P63154 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Crnkl1P63154 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Crnkl1P63154 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Crnkl1P63154 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Crnkl1P63154 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Crnkl1P63154 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Crnkl1P63154 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Crnkl1P63154 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Crnkl1P63154 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Crnkl1P63154 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Crnkl1P63154 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Crnkl1P63154 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Crnkl1P63154 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Crnkl1P63154 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Crnkl1P63154 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Crnkl1P63154 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Crnkl1P63154 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Crnkl1P63154 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Crnkl1P63154 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Crnkl1P63154 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Crnkl1P63154 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Crnkl1P63154 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Crnkl1P63154 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.5■■□□□ 1.19
Crnkl1P63154 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
Crnkl1P63154 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Crnkl1P63154 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Crnkl1P63154 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Crnkl1P63154 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Crnkl1P63154 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Crnkl1P63154 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Crnkl1P63154 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Crnkl1P63154 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
Crnkl1P63154 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Crnkl1P63154 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Crnkl1P63154 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Crnkl1P63154 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Crnkl1P63154 Gm24970-201ENSMUST00000175582 82 ntBASIC22.48■■□□□ 1.19
Crnkl1P63154 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.48■■□□□ 1.19
Crnkl1P63154 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Crnkl1P63154 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Crnkl1P63154 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.47■■□□□ 1.19
Crnkl1P63154 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Crnkl1P63154 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Crnkl1P63154 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.47■■□□□ 1.19
Crnkl1P63154 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Crnkl1P63154 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Crnkl1P63154 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Crnkl1P63154 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Crnkl1P63154 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Crnkl1P63154 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.46■■□□□ 1.19
Crnkl1P63154 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Crnkl1P63154 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.46■■□□□ 1.19
Crnkl1P63154 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Crnkl1P63154 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.45■■□□□ 1.18
Crnkl1P63154 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Crnkl1P63154 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Crnkl1P63154 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.44■■□□□ 1.18
Crnkl1P63154 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Crnkl1P63154 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Crnkl1P63154 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.43■■□□□ 1.18
Crnkl1P63154 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Crnkl1P63154 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
Crnkl1P63154 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Crnkl1P63154 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Crnkl1P63154 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.42■■□□□ 1.18
Crnkl1P63154 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Crnkl1P63154 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
Crnkl1P63154 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Crnkl1P63154 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Crnkl1P63154 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Crnkl1P63154 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.4■■□□□ 1.18
Crnkl1P63154 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Crnkl1P63154 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Crnkl1P63154 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Crnkl1P63154 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Crnkl1P63154 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Crnkl1P63154 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.39■■□□□ 1.18
Crnkl1P63154 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Crnkl1P63154 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Crnkl1P63154 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Crnkl1P63154 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Crnkl1P63154 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Crnkl1P63154 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Crnkl1P63154 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Crnkl1P63154 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Crnkl1P63154 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Crnkl1P63154 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Crnkl1P63154 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Crnkl1P63154 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Crnkl1P63154 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.37■■□□□ 1.17
Crnkl1P63154 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Crnkl1P63154 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Crnkl1P63154 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Crnkl1P63154 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Crnkl1P63154 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Crnkl1P63154 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.35■■□□□ 1.17
Crnkl1P63154 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms