Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Lhx1P63006 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Lhx1P63006 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.7■■□□□ 1.22
Lhx1P63006 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Lhx1P63006 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Lhx1P63006 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Lhx1P63006 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Lhx1P63006 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Lhx1P63006 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.69■■□□□ 1.22
Lhx1P63006 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Lhx1P63006 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Lhx1P63006 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Lhx1P63006 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Lhx1P63006 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lhx1P63006 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Lhx1P63006 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.67■■□□□ 1.22
Lhx1P63006 Gm16437-201ENSMUST00000025669 507 ntBASIC22.67■■□□□ 1.22
Lhx1P63006 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Lhx1P63006 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Lhx1P63006 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Lhx1P63006 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Lhx1P63006 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Lhx1P63006 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Lhx1P63006 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Lhx1P63006 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Lhx1P63006 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Lhx1P63006 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lhx1P63006 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lhx1P63006 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Lhx1P63006 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Lhx1P63006 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Lhx1P63006 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.63■■□□□ 1.21
Lhx1P63006 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.63■■□□□ 1.21
Lhx1P63006 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lhx1P63006 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lhx1P63006 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Lhx1P63006 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lhx1P63006 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lhx1P63006 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lhx1P63006 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lhx1P63006 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lhx1P63006 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lhx1P63006 Terc-201ENSMUST00000082862 423 ntBASIC22.6■■□□□ 1.21
Lhx1P63006 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Lhx1P63006 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.59■■□□□ 1.21
Lhx1P63006 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lhx1P63006 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lhx1P63006 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Lhx1P63006 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Lhx1P63006 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Lhx1P63006 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lhx1P63006 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.57■■□□□ 1.2
Lhx1P63006 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.57■■□□□ 1.2
Lhx1P63006 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Lhx1P63006 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Lhx1P63006 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.57■■□□□ 1.2
Lhx1P63006 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lhx1P63006 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Lhx1P63006 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lhx1P63006 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lhx1P63006 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.55■■□□□ 1.2
Lhx1P63006 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.55■■□□□ 1.2
Lhx1P63006 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.55■■□□□ 1.2
Lhx1P63006 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.55■■□□□ 1.2
Lhx1P63006 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lhx1P63006 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Lhx1P63006 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lhx1P63006 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lhx1P63006 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lhx1P63006 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lhx1P63006 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lhx1P63006 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lhx1P63006 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lhx1P63006 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lhx1P63006 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lhx1P63006 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lhx1P63006 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lhx1P63006 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Lhx1P63006 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lhx1P63006 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lhx1P63006 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lhx1P63006 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lhx1P63006 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Lhx1P63006 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Lhx1P63006 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lhx1P63006 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Lhx1P63006 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.48■■□□□ 1.19
Lhx1P63006 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.48■■□□□ 1.19
Lhx1P63006 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Lhx1P63006 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lhx1P63006 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.47■■□□□ 1.19
Lhx1P63006 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
Lhx1P63006 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lhx1P63006 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lhx1P63006 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lhx1P63006 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Lhx1P63006 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Lhx1P63006 Cap2-205ENSMUST00000225824 1634 ntBASIC22.46■■□□□ 1.19
Lhx1P63006 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Lhx1P63006 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms