Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cxcl12P40224 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Cxcl12P40224 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cxcl12P40224 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.4■■□□□ 1.5
Cxcl12P40224 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cxcl12P40224 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Cxcl12P40224 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.39■■□□□ 1.49
Cxcl12P40224 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cxcl12P40224 Gm15820-201ENSMUST00000201566 728 ntBASIC24.38■■□□□ 1.49
Cxcl12P40224 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.38■■□□□ 1.49
Cxcl12P40224 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cxcl12P40224 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cxcl12P40224 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.37■■□□□ 1.49
Cxcl12P40224 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Cxcl12P40224 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cxcl12P40224 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Cxcl12P40224 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Cxcl12P40224 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Cxcl12P40224 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cxcl12P40224 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cxcl12P40224 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cxcl12P40224 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.35■■□□□ 1.49
Cxcl12P40224 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cxcl12P40224 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cxcl12P40224 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Cxcl12P40224 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cxcl12P40224 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cxcl12P40224 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.33■■□□□ 1.49
Cxcl12P40224 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.32■■□□□ 1.48
Cxcl12P40224 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cxcl12P40224 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Cxcl12P40224 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Cxcl12P40224 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cxcl12P40224 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.3■■□□□ 1.48
Cxcl12P40224 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.29■■□□□ 1.48
Cxcl12P40224 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.29■■□□□ 1.48
Cxcl12P40224 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cxcl12P40224 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cxcl12P40224 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
Cxcl12P40224 Gm45102-201ENSMUST00000207427 857 ntBASIC24.27■■□□□ 1.48
Cxcl12P40224 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cxcl12P40224 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cxcl12P40224 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cxcl12P40224 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Cxcl12P40224 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Cxcl12P40224 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.24■■□□□ 1.47
Cxcl12P40224 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Cxcl12P40224 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Cxcl12P40224 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.23■■□□□ 1.47
Cxcl12P40224 Gm43566-201ENSMUST00000196851 808 ntBASIC24.23■■□□□ 1.47
Cxcl12P40224 Gm44428-201ENSMUST00000204474 874 ntBASIC24.23■■□□□ 1.47
Cxcl12P40224 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Cxcl12P40224 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.23■■□□□ 1.47
Cxcl12P40224 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cxcl12P40224 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cxcl12P40224 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cxcl12P40224 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cxcl12P40224 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cxcl12P40224 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cxcl12P40224 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.22■■□□□ 1.47
Cxcl12P40224 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cxcl12P40224 Gm14117-201ENSMUST00000122417 843 ntBASIC24.22■■□□□ 1.47
Cxcl12P40224 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cxcl12P40224 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
Cxcl12P40224 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cxcl12P40224 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Cxcl12P40224 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.21■■□□□ 1.47
Cxcl12P40224 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Cxcl12P40224 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cxcl12P40224 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cxcl12P40224 Gm13238-201ENSMUST00000117655 780 ntBASIC24.2■■□□□ 1.46
Cxcl12P40224 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.19■■□□□ 1.46
Cxcl12P40224 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cxcl12P40224 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Cxcl12P40224 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Cxcl12P40224 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cxcl12P40224 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cxcl12P40224 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cxcl12P40224 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.18■■□□□ 1.46
Cxcl12P40224 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cxcl12P40224 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cxcl12P40224 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cxcl12P40224 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cxcl12P40224 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cxcl12P40224 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
Cxcl12P40224 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.16■■□□□ 1.46
Cxcl12P40224 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.16■■□□□ 1.46
Cxcl12P40224 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.16■■□□□ 1.46
Cxcl12P40224 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cxcl12P40224 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Cxcl12P40224 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cxcl12P40224 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cxcl12P40224 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cxcl12P40224 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Cxcl12P40224 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.14■■□□□ 1.46
Cxcl12P40224 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
Cxcl12P40224 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Cxcl12P40224 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.13■■□□□ 1.45
Cxcl12P40224 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.13■■□□□ 1.45
Cxcl12P40224 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms