Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.78■□□□□ 0.76
Dkk1O54908 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.77■□□□□ 0.76
Dkk1O54908 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Dkk1O54908 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.77■□□□□ 0.76
Dkk1O54908 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.77■□□□□ 0.76
Dkk1O54908 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dkk1O54908 Gm4799-201ENSMUST00000095396 657 ntBASIC19.77■□□□□ 0.76
Dkk1O54908 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Dkk1O54908 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dkk1O54908 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dkk1O54908 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Dkk1O54908 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dkk1O54908 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dkk1O54908 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.75■□□□□ 0.75
Dkk1O54908 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.75■□□□□ 0.75
Dkk1O54908 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dkk1O54908 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dkk1O54908 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dkk1O54908 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.74■□□□□ 0.75
Dkk1O54908 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dkk1O54908 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.74■□□□□ 0.75
Dkk1O54908 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dkk1O54908 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dkk1O54908 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Dkk1O54908 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Dkk1O54908 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.73■□□□□ 0.75
Dkk1O54908 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.73■□□□□ 0.75
Dkk1O54908 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dkk1O54908 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dkk1O54908 Mir3960-201ENSMUST00000198213 73 ntBASIC19.72■□□□□ 0.75
Dkk1O54908 Gm45364-201ENSMUST00000210883 159 ntBASIC19.72■□□□□ 0.75
Dkk1O54908 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dkk1O54908 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dkk1O54908 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.71■□□□□ 0.75
Dkk1O54908 Gm9812-201ENSMUST00000061934 968 ntBASIC19.7■□□□□ 0.74
Dkk1O54908 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dkk1O54908 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.7■□□□□ 0.74
Dkk1O54908 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Dkk1O54908 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.69■□□□□ 0.74
Dkk1O54908 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dkk1O54908 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dkk1O54908 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dkk1O54908 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dkk1O54908 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dkk1O54908 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Dkk1O54908 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.68■□□□□ 0.74
Dkk1O54908 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dkk1O54908 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dkk1O54908 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dkk1O54908 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Dkk1O54908 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dkk1O54908 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dkk1O54908 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Dkk1O54908 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dkk1O54908 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dkk1O54908 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.67■□□□□ 0.74
Dkk1O54908 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dkk1O54908 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Dkk1O54908 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Dkk1O54908 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dkk1O54908 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Dkk1O54908 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dkk1O54908 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dkk1O54908 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.66■□□□□ 0.74
Dkk1O54908 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Dkk1O54908 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Dkk1O54908 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dkk1O54908 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dkk1O54908 Gm43371-201ENSMUST00000202838 1031 ntBASIC19.65■□□□□ 0.74
Dkk1O54908 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.65■□□□□ 0.74
Dkk1O54908 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dkk1O54908 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.65■□□□□ 0.74
Dkk1O54908 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.64■□□□□ 0.73
Dkk1O54908 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dkk1O54908 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dkk1O54908 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC19.63■□□□□ 0.73
Dkk1O54908 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Dkk1O54908 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Dkk1O54908 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Dkk1O54908 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.62■□□□□ 0.73
Dkk1O54908 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Dkk1O54908 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.62■□□□□ 0.73
Dkk1O54908 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Dkk1O54908 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Dkk1O54908 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dkk1O54908 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Dkk1O54908 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dkk1O54908 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Dkk1O54908 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.61■□□□□ 0.73
Dkk1O54908 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dkk1O54908 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dkk1O54908 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.6■□□□□ 0.73
Dkk1O54908 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Dkk1O54908 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.59■□□□□ 0.73
Dkk1O54908 Gm6311-201ENSMUST00000073790 878 ntBASIC19.59■□□□□ 0.73
Dkk1O54908 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Dkk1O54908 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Dkk1O54908 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Dkk1O54908 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Dkk1O54908 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms