Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm2O35900 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.63■□□□□ 0.89
Lsm2O35900 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm2O35900 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Lsm2O35900 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm2O35900 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm2O35900 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Lsm2O35900 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lsm2O35900 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm2O35900 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.61■□□□□ 0.89
Lsm2O35900 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Lsm2O35900 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm2O35900 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm2O35900 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Lsm2O35900 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm2O35900 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm2O35900 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Lsm2O35900 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm2O35900 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm2O35900 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lsm2O35900 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Lsm2O35900 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Lsm2O35900 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lsm2O35900 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm2O35900 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Lsm2O35900 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm2O35900 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm2O35900 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Lsm2O35900 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsm2O35900 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsm2O35900 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lsm2O35900 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm2O35900 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm2O35900 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm2O35900 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm2O35900 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm2O35900 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm2O35900 Gm30023-201ENSMUST00000197970 889 ntBASIC20.54■□□□□ 0.88
Lsm2O35900 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.54■□□□□ 0.88
Lsm2O35900 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm2O35900 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm2O35900 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm2O35900 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm2O35900 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Lsm2O35900 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lsm2O35900 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lsm2O35900 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lsm2O35900 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lsm2O35900 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lsm2O35900 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lsm2O35900 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm2O35900 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm2O35900 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.51■□□□□ 0.87
Lsm2O35900 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm2O35900 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Lsm2O35900 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm2O35900 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm2O35900 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Lsm2O35900 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm2O35900 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm2O35900 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm2O35900 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm2O35900 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm2O35900 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Lsm2O35900 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm2O35900 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm2O35900 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm2O35900 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm2O35900 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm2O35900 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm2O35900 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm2O35900 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.48■□□□□ 0.87
Lsm2O35900 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.48■□□□□ 0.87
Lsm2O35900 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsm2O35900 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsm2O35900 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lsm2O35900 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Lsm2O35900 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.46■□□□□ 0.87
Lsm2O35900 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm2O35900 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Lsm2O35900 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lsm2O35900 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm2O35900 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.45■□□□□ 0.86
Lsm2O35900 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm2O35900 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm2O35900 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.44■□□□□ 0.86
Lsm2O35900 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm2O35900 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.44■□□□□ 0.86
Lsm2O35900 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm2O35900 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm2O35900 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm2O35900 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm2O35900 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Lsm2O35900 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm2O35900 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.42■□□□□ 0.86
Lsm2O35900 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm2O35900 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm2O35900 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm2O35900 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm2O35900 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 1241.1 ms