Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Atf6bO35451 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Atf6bO35451 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6bO35451 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6bO35451 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.73■□□□□ 0.75
Atf6bO35451 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6bO35451 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Atf6bO35451 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6bO35451 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6bO35451 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atf6bO35451 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atf6bO35451 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atf6bO35451 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atf6bO35451 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atf6bO35451 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Atf6bO35451 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atf6bO35451 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Atf6bO35451 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Atf6bO35451 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Atf6bO35451 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Atf6bO35451 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Atf6bO35451 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf6bO35451 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf6bO35451 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf6bO35451 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf6bO35451 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atf6bO35451 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.66■□□□□ 0.74
Atf6bO35451 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.66■□□□□ 0.74
Atf6bO35451 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.66■□□□□ 0.74
Atf6bO35451 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf6bO35451 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.65■□□□□ 0.74
Atf6bO35451 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf6bO35451 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Atf6bO35451 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf6bO35451 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Atf6bO35451 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Atf6bO35451 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.64■□□□□ 0.73
Atf6bO35451 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Atf6bO35451 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf6bO35451 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf6bO35451 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf6bO35451 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf6bO35451 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf6bO35451 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.63■□□□□ 0.73
Atf6bO35451 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf6bO35451 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Atf6bO35451 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf6bO35451 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.62■□□□□ 0.73
Atf6bO35451 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf6bO35451 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf6bO35451 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Atf6bO35451 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf6bO35451 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Atf6bO35451 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf6bO35451 Gm4799-201ENSMUST00000095396 657 ntBASIC19.61■□□□□ 0.73
Atf6bO35451 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.6■□□□□ 0.73
Atf6bO35451 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Atf6bO35451 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6bO35451 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6bO35451 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6bO35451 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf6bO35451 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf6bO35451 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf6bO35451 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf6bO35451 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf6bO35451 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf6bO35451 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf6bO35451 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Atf6bO35451 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf6bO35451 Gm6311-201ENSMUST00000073790 878 ntBASIC19.57■□□□□ 0.72
Atf6bO35451 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atf6bO35451 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf6bO35451 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6bO35451 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.56■□□□□ 0.72
Atf6bO35451 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.56■□□□□ 0.72
Atf6bO35451 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6bO35451 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6bO35451 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Atf6bO35451 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.56■□□□□ 0.72
Atf6bO35451 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf6bO35451 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Atf6bO35451 Mir3960-201ENSMUST00000198213 73 ntBASIC19.55■□□□□ 0.72
Atf6bO35451 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.55■□□□□ 0.72
Atf6bO35451 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Atf6bO35451 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf6bO35451 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.54■□□□□ 0.72
Atf6bO35451 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.54■□□□□ 0.72
Atf6bO35451 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atf6bO35451 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atf6bO35451 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.53■□□□□ 0.72
Atf6bO35451 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6bO35451 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Atf6bO35451 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6bO35451 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6bO35451 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6bO35451 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.52■□□□□ 0.72
Atf6bO35451 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.52■□□□□ 0.72
Atf6bO35451 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.52■□□□□ 0.72
Atf6bO35451 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atf6bO35451 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms