Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
9930021J03RikH3BKP8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
9930021J03RikH3BKP8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
9930021J03RikH3BKP8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
9930021J03RikH3BKP8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.51■■□□□ 1.03
9930021J03RikH3BKP8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.5■■□□□ 1.03
9930021J03RikH3BKP8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
9930021J03RikH3BKP8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
9930021J03RikH3BKP8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
9930021J03RikH3BKP8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
9930021J03RikH3BKP8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
9930021J03RikH3BKP8 Mir3960-201ENSMUST00000198213 73 ntBASIC21.48■■□□□ 1.03
9930021J03RikH3BKP8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
9930021J03RikH3BKP8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.48■■□□□ 1.03
9930021J03RikH3BKP8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
9930021J03RikH3BKP8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
9930021J03RikH3BKP8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
9930021J03RikH3BKP8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
9930021J03RikH3BKP8 Gm4799-201ENSMUST00000095396 657 ntBASIC21.46■■□□□ 1.03
9930021J03RikH3BKP8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
9930021J03RikH3BKP8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.46■■□□□ 1.03
9930021J03RikH3BKP8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
9930021J03RikH3BKP8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
9930021J03RikH3BKP8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
9930021J03RikH3BKP8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
9930021J03RikH3BKP8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
9930021J03RikH3BKP8 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.44■■□□□ 1.02
9930021J03RikH3BKP8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
9930021J03RikH3BKP8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
9930021J03RikH3BKP8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
9930021J03RikH3BKP8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
9930021J03RikH3BKP8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
9930021J03RikH3BKP8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
9930021J03RikH3BKP8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
9930021J03RikH3BKP8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
9930021J03RikH3BKP8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
9930021J03RikH3BKP8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.41■■□□□ 1.02
9930021J03RikH3BKP8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
9930021J03RikH3BKP8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.41■■□□□ 1.02
9930021J03RikH3BKP8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
9930021J03RikH3BKP8 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.41■■□□□ 1.02
9930021J03RikH3BKP8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
9930021J03RikH3BKP8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
9930021J03RikH3BKP8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.4■■□□□ 1.02
9930021J03RikH3BKP8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.39■■□□□ 1.02
9930021J03RikH3BKP8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
9930021J03RikH3BKP8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
9930021J03RikH3BKP8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
9930021J03RikH3BKP8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
9930021J03RikH3BKP8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
9930021J03RikH3BKP8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
9930021J03RikH3BKP8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
9930021J03RikH3BKP8 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.37■■□□□ 1.01
9930021J03RikH3BKP8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
9930021J03RikH3BKP8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
9930021J03RikH3BKP8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
9930021J03RikH3BKP8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
9930021J03RikH3BKP8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
9930021J03RikH3BKP8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
9930021J03RikH3BKP8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
9930021J03RikH3BKP8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
9930021J03RikH3BKP8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
9930021J03RikH3BKP8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
9930021J03RikH3BKP8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
9930021J03RikH3BKP8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
9930021J03RikH3BKP8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
9930021J03RikH3BKP8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
9930021J03RikH3BKP8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
9930021J03RikH3BKP8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
9930021J03RikH3BKP8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
9930021J03RikH3BKP8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.34■■□□□ 1.01
9930021J03RikH3BKP8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
9930021J03RikH3BKP8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
9930021J03RikH3BKP8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
9930021J03RikH3BKP8 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.33■■□□□ 1.01
9930021J03RikH3BKP8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
9930021J03RikH3BKP8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
9930021J03RikH3BKP8 Mir6538-201ENSMUST00000183713 110 ntBASIC21.33■■□□□ 1.01
9930021J03RikH3BKP8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
9930021J03RikH3BKP8 Gm16437-201ENSMUST00000025669 507 ntBASIC21.33■■□□□ 1.01
9930021J03RikH3BKP8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
9930021J03RikH3BKP8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
9930021J03RikH3BKP8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.33■■□□□ 1
9930021J03RikH3BKP8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
9930021J03RikH3BKP8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
9930021J03RikH3BKP8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.33■■□□□ 1
9930021J03RikH3BKP8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
9930021J03RikH3BKP8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
9930021J03RikH3BKP8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
9930021J03RikH3BKP8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
9930021J03RikH3BKP8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
9930021J03RikH3BKP8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
9930021J03RikH3BKP8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.31■■□□□ 1
9930021J03RikH3BKP8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
9930021J03RikH3BKP8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
9930021J03RikH3BKP8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
9930021J03RikH3BKP8 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.3■■□□□ 1
9930021J03RikH3BKP8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
9930021J03RikH3BKP8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
9930021J03RikH3BKP8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms