Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
Ccdc141E9Q8Q6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC36.06■■■■□ 3.36
Ccdc141E9Q8Q6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
Ccdc141E9Q8Q6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
Ccdc141E9Q8Q6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC36.03■■■■□ 3.36
Ccdc141E9Q8Q6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Ccdc141E9Q8Q6 Gm15039-201ENSMUST00000118914 875 ntBASIC36.03■■■■□ 3.36
Ccdc141E9Q8Q6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC36.02■■■■□ 3.36
Ccdc141E9Q8Q6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC36.02■■■■□ 3.36
Ccdc141E9Q8Q6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC36.01■■■■□ 3.36
Ccdc141E9Q8Q6 Terc-201ENSMUST00000082862 423 ntBASIC36■■■■□ 3.35
Ccdc141E9Q8Q6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC35.99■■■■□ 3.35
Ccdc141E9Q8Q6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC35.98■■■■□ 3.35
Ccdc141E9Q8Q6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Ccdc141E9Q8Q6 Gm14121-201ENSMUST00000121441 1380 ntBASIC35.97■■■■□ 3.35
Ccdc141E9Q8Q6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
Ccdc141E9Q8Q6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
Ccdc141E9Q8Q6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
Ccdc141E9Q8Q6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC35.92■■■■□ 3.34
Ccdc141E9Q8Q6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC35.92■■■■□ 3.34
Ccdc141E9Q8Q6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Ccdc141E9Q8Q6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC35.91■■■■□ 3.34
Ccdc141E9Q8Q6 Gm5522-201ENSMUST00000189483 1242 ntBASIC35.89■■■■□ 3.34
Ccdc141E9Q8Q6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Ccdc141E9Q8Q6 Gm15546-201ENSMUST00000122095 826 ntBASIC35.88■■■■□ 3.33
Ccdc141E9Q8Q6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC35.88■■■■□ 3.33
Ccdc141E9Q8Q6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
Ccdc141E9Q8Q6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC35.88■■■■□ 3.33
Ccdc141E9Q8Q6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Ccdc141E9Q8Q6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC35.86■■■■□ 3.33
Ccdc141E9Q8Q6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC35.86■■■■□ 3.33
Ccdc141E9Q8Q6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Ccdc141E9Q8Q6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Ccdc141E9Q8Q6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Ccdc141E9Q8Q6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Ccdc141E9Q8Q6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
Ccdc141E9Q8Q6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Ccdc141E9Q8Q6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC35.82■■■■□ 3.33
Ccdc141E9Q8Q6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC35.82■■■■□ 3.33
Ccdc141E9Q8Q6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Ccdc141E9Q8Q6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Ccdc141E9Q8Q6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Ccdc141E9Q8Q6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC35.82■■■■□ 3.32
Ccdc141E9Q8Q6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
Ccdc141E9Q8Q6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC35.8■■■■□ 3.32
Ccdc141E9Q8Q6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
Ccdc141E9Q8Q6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC35.79■■■■□ 3.32
Ccdc141E9Q8Q6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
Ccdc141E9Q8Q6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC35.79■■■■□ 3.32
Ccdc141E9Q8Q6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC35.78■■■■□ 3.32
Ccdc141E9Q8Q6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
Ccdc141E9Q8Q6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Ccdc141E9Q8Q6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
Ccdc141E9Q8Q6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC35.78■■■■□ 3.32
Ccdc141E9Q8Q6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC35.78■■■■□ 3.32
Ccdc141E9Q8Q6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC35.78■■■■□ 3.32
Ccdc141E9Q8Q6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Ccdc141E9Q8Q6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Ccdc141E9Q8Q6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC35.76■■■■□ 3.31
Ccdc141E9Q8Q6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
Ccdc141E9Q8Q6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Ccdc141E9Q8Q6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
Ccdc141E9Q8Q6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Ccdc141E9Q8Q6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Ccdc141E9Q8Q6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Ccdc141E9Q8Q6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Ccdc141E9Q8Q6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC35.73■■■■□ 3.31
Ccdc141E9Q8Q6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC35.73■■■■□ 3.31
Ccdc141E9Q8Q6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Ccdc141E9Q8Q6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
Ccdc141E9Q8Q6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC35.72■■■■□ 3.31
Ccdc141E9Q8Q6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Ccdc141E9Q8Q6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
Ccdc141E9Q8Q6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC35.71■■■■□ 3.31
Ccdc141E9Q8Q6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC35.71■■■■□ 3.31
Ccdc141E9Q8Q6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC35.71■■■■□ 3.31
Ccdc141E9Q8Q6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC35.7■■■■□ 3.31
Ccdc141E9Q8Q6 Zxda-201ENSMUST00000117281 2621 ntBASIC35.7■■■■□ 3.3
Ccdc141E9Q8Q6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC35.69■■■■□ 3.3
Ccdc141E9Q8Q6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
Ccdc141E9Q8Q6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC35.69■■■■□ 3.3
Ccdc141E9Q8Q6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC35.68■■■■□ 3.3
Ccdc141E9Q8Q6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC35.68■■■■□ 3.3
Ccdc141E9Q8Q6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Ccdc141E9Q8Q6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC35.67■■■■□ 3.3
Ccdc141E9Q8Q6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Ccdc141E9Q8Q6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
Ccdc141E9Q8Q6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC35.65■■■■□ 3.3
Ccdc141E9Q8Q6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC35.65■■■■□ 3.3
Ccdc141E9Q8Q6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
Ccdc141E9Q8Q6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
Ccdc141E9Q8Q6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC35.64■■■■□ 3.3
Ccdc141E9Q8Q6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
Ccdc141E9Q8Q6 Gm44428-201ENSMUST00000204474 874 ntBASIC35.63■■■■□ 3.29
Ccdc141E9Q8Q6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Ccdc141E9Q8Q6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Ccdc141E9Q8Q6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC35.63■■■■□ 3.29
Ccdc141E9Q8Q6 Gm43566-201ENSMUST00000196851 808 ntBASIC35.62■■■■□ 3.29
Ccdc141E9Q8Q6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC35.62■■■■□ 3.29
Ccdc141E9Q8Q6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC35.61■■■■□ 3.29
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms