Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Igkv3-3A0A140T8Q0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Igkv3-3A0A140T8Q0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Igkv3-3A0A140T8Q0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Igkv3-3A0A140T8Q0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC13.83□□□□□ -0.19
Igkv3-3A0A140T8Q0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Igkv3-3A0A140T8Q0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv3-3A0A140T8Q0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv3-3A0A140T8Q0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Igkv3-3A0A140T8Q0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv3-3A0A140T8Q0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv3-3A0A140T8Q0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Igkv3-3A0A140T8Q0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Igkv3-3A0A140T8Q0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Igkv3-3A0A140T8Q0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Igkv3-3A0A140T8Q0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Igkv3-3A0A140T8Q0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Igkv3-3A0A140T8Q0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Igkv3-3A0A140T8Q0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Igkv3-3A0A140T8Q0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv3-3A0A140T8Q0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv3-3A0A140T8Q0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv3-3A0A140T8Q0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv3-3A0A140T8Q0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Igkv3-3A0A140T8Q0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv3-3A0A140T8Q0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Igkv3-3A0A140T8Q0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv3-3A0A140T8Q0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv3-3A0A140T8Q0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv3-3A0A140T8Q0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
Igkv3-3A0A140T8Q0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Igkv3-3A0A140T8Q0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv3-3A0A140T8Q0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv3-3A0A140T8Q0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv3-3A0A140T8Q0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv3-3A0A140T8Q0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv3-3A0A140T8Q0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv3-3A0A140T8Q0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv3-3A0A140T8Q0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv3-3A0A140T8Q0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Igkv3-3A0A140T8Q0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Igkv3-3A0A140T8Q0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Igkv3-3A0A140T8Q0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.77□□□□□ -0.2
Igkv3-3A0A140T8Q0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Igkv3-3A0A140T8Q0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Igkv3-3A0A140T8Q0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv3-3A0A140T8Q0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv3-3A0A140T8Q0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv3-3A0A140T8Q0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv3-3A0A140T8Q0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.77□□□□□ -0.21
Igkv3-3A0A140T8Q0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv3-3A0A140T8Q0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv3-3A0A140T8Q0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv3-3A0A140T8Q0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Igkv3-3A0A140T8Q0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-3A0A140T8Q0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-3A0A140T8Q0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-3A0A140T8Q0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-3A0A140T8Q0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-3A0A140T8Q0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-3A0A140T8Q0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-3A0A140T8Q0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-3A0A140T8Q0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-3A0A140T8Q0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Igkv3-3A0A140T8Q0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-3A0A140T8Q0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-3A0A140T8Q0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC13.73□□□□□ -0.21
Igkv3-3A0A140T8Q0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-3A0A140T8Q0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-3A0A140T8Q0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-3A0A140T8Q0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-3A0A140T8Q0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Igkv3-3A0A140T8Q0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Igkv3-3A0A140T8Q0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-3A0A140T8Q0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Igkv3-3A0A140T8Q0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-3A0A140T8Q0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-3A0A140T8Q0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-3A0A140T8Q0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-3A0A140T8Q0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-3A0A140T8Q0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-3A0A140T8Q0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-3A0A140T8Q0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-3A0A140T8Q0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Igkv3-3A0A140T8Q0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Igkv3-3A0A140T8Q0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Igkv3-3A0A140T8Q0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-3A0A140T8Q0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-3A0A140T8Q0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-3A0A140T8Q0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-3A0A140T8Q0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-3A0A140T8Q0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC13.7□□□□□ -0.22
Igkv3-3A0A140T8Q0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Igkv3-3A0A140T8Q0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-3A0A140T8Q0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC13.7□□□□□ -0.22
Igkv3-3A0A140T8Q0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-3A0A140T8Q0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-3A0A140T8Q0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-3A0A140T8Q0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-3A0A140T8Q0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms