Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Trav4-3A0A0B4J1K1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4-3A0A0B4J1K1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Trav4-3A0A0B4J1K1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4-3A0A0B4J1K1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4-3A0A0B4J1K1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4-3A0A0B4J1K1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4-3A0A0B4J1K1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4-3A0A0B4J1K1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav4-3A0A0B4J1K1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav4-3A0A0B4J1K1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Trav4-3A0A0B4J1K1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4-3A0A0B4J1K1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4-3A0A0B4J1K1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Trav4-3A0A0B4J1K1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4-3A0A0B4J1K1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4-3A0A0B4J1K1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4-3A0A0B4J1K1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav4-3A0A0B4J1K1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4-3A0A0B4J1K1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4-3A0A0B4J1K1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4-3A0A0B4J1K1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4-3A0A0B4J1K1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav4-3A0A0B4J1K1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav4-3A0A0B4J1K1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-3A0A0B4J1K1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav4-3A0A0B4J1K1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.68■□□□□ 0.1
Trav4-3A0A0B4J1K1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-3A0A0B4J1K1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav4-3A0A0B4J1K1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-3A0A0B4J1K1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav4-3A0A0B4J1K1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-3A0A0B4J1K1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-3A0A0B4J1K1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-3A0A0B4J1K1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-3A0A0B4J1K1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-3A0A0B4J1K1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-3A0A0B4J1K1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-3A0A0B4J1K1 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.65■□□□□ 0.1
Trav4-3A0A0B4J1K1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-3A0A0B4J1K1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-3A0A0B4J1K1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-3A0A0B4J1K1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-3A0A0B4J1K1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Trav4-3A0A0B4J1K1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-3A0A0B4J1K1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-3A0A0B4J1K1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-3A0A0B4J1K1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-3A0A0B4J1K1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-3A0A0B4J1K1 Particl-201ENSMUST00000205370 1560 ntBASIC15.62■□□□□ 0.09
Trav4-3A0A0B4J1K1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-3A0A0B4J1K1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-3A0A0B4J1K1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-3A0A0B4J1K1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-3A0A0B4J1K1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-3A0A0B4J1K1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-3A0A0B4J1K1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-3A0A0B4J1K1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-3A0A0B4J1K1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-3A0A0B4J1K1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-3A0A0B4J1K1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav4-3A0A0B4J1K1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-3A0A0B4J1K1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-3A0A0B4J1K1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-3A0A0B4J1K1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-3A0A0B4J1K1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-3A0A0B4J1K1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-3A0A0B4J1K1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-3A0A0B4J1K1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-3A0A0B4J1K1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-3A0A0B4J1K1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav4-3A0A0B4J1K1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-3A0A0B4J1K1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-3A0A0B4J1K1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-3A0A0B4J1K1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-3A0A0B4J1K1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-3A0A0B4J1K1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-3A0A0B4J1K1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav4-3A0A0B4J1K1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-3A0A0B4J1K1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav4-3A0A0B4J1K1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.58■□□□□ 0.09
Trav4-3A0A0B4J1K1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav4-3A0A0B4J1K1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav4-3A0A0B4J1K1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav4-3A0A0B4J1K1 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.58■□□□□ 0.08
Trav4-3A0A0B4J1K1 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.58■□□□□ 0.08
Trav4-3A0A0B4J1K1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-3A0A0B4J1K1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms