Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.21■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.21■□□□□ 0.5
Trbv12-2A0A0B4J1H1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv12-2A0A0B4J1H1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Trbv12-2A0A0B4J1H1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.18■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv12-2A0A0B4J1H1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.17■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Gm24804-201ENSMUST00000174982 85 ntBASIC18.17■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.16■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv12-2A0A0B4J1H1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv12-2A0A0B4J1H1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.1■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.08■□□□□ 0.49
Trbv12-2A0A0B4J1H1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv12-2A0A0B4J1H1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Gm30023-201ENSMUST00000197970 889 ntBASIC18.07■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.07■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv12-2A0A0B4J1H1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.06■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv12-2A0A0B4J1H1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv12-2A0A0B4J1H1 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.05■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 148.5 ms